RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 TSTD1Q8NFU3 115 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 DNAJB14Q8TBM8 379 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 GLMNQ92990 594 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 NELL2Q99435 816 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 TPSD1Q9BZJ3 242 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 AMBRA1Q9C0C7 1298 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 SLIRPQ9GZT3 109 aaKnown RBP13.24□□□□□ -0.29
COPS7B-221ENST00000488111 DSN1Q9H410 356 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 FZD3Q9NPG1 666 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 MAGED1Q9Y5V3 778 aaPredicted RBP13.24□□□□□ -0.29
COPS7B-221ENST00000488111 A0A1W2PP18 115 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 ASPDHA6ND91 283 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 OR2AG2A6NM03 316 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 SLC31A1O15431 190 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 VPS26AO75436 327 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 MSH3P20585 1137 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 RPS21P63220 83 aaKnown RBP13.24□□□□□ -0.29
COPS7B-221ENST00000488111 SGCGQ13326 291 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 CARTPTQ16568 116 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 ZNF181Q2M3W8 571 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 UNC50Q53HI1 259 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 RAVER1Q8IY67 606 aaKnown RBP13.24□□□□□ -0.29
COPS7B-221ENST00000488111 BEND7Q8N7W2 519 aaPredicted RBP13.24□□□□□ -0.29
COPS7B-221ENST00000488111 RLN3Q8WXF3 142 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 ZNF566Q969W8 418 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 DACH2Q96NX9 599 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 OR2B2Q9GZK3 357 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 ITM2CQ9NQX7 267 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 GIMAP2Q9UG22 337 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 FZD4Q9ULV1 537 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 CYP8B1Q9UNU6 501 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 EIF3LQ9Y262 564 aaKnown RBP13.24□□□□□ -0.29
COPS7B-221ENST00000488111 PCDHB1Q9Y5F3 818 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 DNAJC15Q9Y5T4 150 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 LRRK1Q38SD2 2015 aa13.24□□□□□ -0.29
COPS7B-221ENST00000488111 IGLV3-16A0A075B6K0 115 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 RAD51BO15315 384 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 ATG13O75143 517 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 PDGFBP01127 241 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 FGF4P08620 206 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 ATP1B2P14415 290 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 TSPAN8P19075 237 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 RPS3P23396 243 aaKnown RBP eCLIP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 PIGAP37287 484 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 MRPL19P49406 292 aaKnown RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 TPD52P55327 224 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 EMX1Q04741 257 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 DPTQ07507 201 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 ZNF765Q7L2R6 523 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 ZNF555Q8NEP9 628 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 PSMA8Q8TAA3 256 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 KCNJ9Q92806 393 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 ARPC5LQ9BPX5 153 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 SLC17A9Q9BYT1 436 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 BTBD1Q9H0C5 482 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 ZNF106Q9H2Y7 1883 aaKnown RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 USE1Q9NZ43 259 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 TRMT6Q9UJA5 497 aaKnown RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 USP22Q9UPT9 525 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 V9GYQ6 96 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 MN1Q10571 1320 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 ZFC3H1O60293 1989 aaKnown RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 EEDO75530 441 aaKnown RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 WISP3O95389 354 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 CCDC159P0C7I6 412 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 ZNF37AP17032 561 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 CLCN7P51798 805 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 ISL1P61371 349 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 VBP1P61758 197 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 COPZ1P61923 177 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 TMEM115Q12893 351 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.23□□□□□ -0.29
COPS7B-221ENST00000488111 PNCKQ6P2M8 343 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 MACC1Q6ZN28 852 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 P2RY8Q86VZ1 359 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 HORMAD1Q86X24 394 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 SVOPQ8N4V2 548 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 RASGEF1AQ8N9B8 481 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 CD200R1Q8TD46 325 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 NSMCE2Q96MF7 247 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 VPS35Q96QK1 796 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 LGR4Q9BXB1 951 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 OSBPL10Q9BXB5 764 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 MARCH7Q9H992 704 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 FAM8A1Q9UBU6 413 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 CARD8Q9Y2G2 431 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 SIT1Q9Y3P8 196 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 PTGDR2Q9Y5Y4 395 aa13.23□□□□□ -0.29
COPS7B-221ENST00000488111 SAGE2PA6NJ88 616 aa13.22□□□□□ -0.29
COPS7B-221ENST00000488111 PIP5K1BO14986 540 aa13.22□□□□□ -0.29
COPS7B-221ENST00000488111 SUPT7LO94864 414 aa13.22□□□□□ -0.29
COPS7B-221ENST00000488111 PTTG1O95997 202 aa13.22□□□□□ -0.29
COPS7B-221ENST00000488111 ENO2P09104 434 aaPredicted RBP13.22□□□□□ -0.29
COPS7B-221ENST00000488111 RAP2AP10114 183 aa13.22□□□□□ -0.29
COPS7B-221ENST00000488111 LBPP18428 481 aa13.22□□□□□ -0.29
COPS7B-221ENST00000488111 ALDH4A1P30038 563 aa13.22□□□□□ -0.29
COPS7B-221ENST00000488111 ZFP36L2P47974 494 aaKnown RBP13.22□□□□□ -0.29
COPS7B-221ENST00000488111 CTSCP53634 463 aa13.22□□□□□ -0.29
COPS7B-221ENST00000488111 PPP2R2BQ00005 443 aa13.22□□□□□ -0.29
COPS7B-221ENST00000488111 NFKB2Q00653 900 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms