RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 MSRB3Q8IXL7 192 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 NAGSQ8N159 534 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 OR4E2Q8NGC2 313 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 PATE1Q8WXA2 126 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 OR52E6Q96RD3 313 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 ZNF717Q9BY31 904 aaPredicted RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 NANOGQ9H9S0 305 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 TM9SF3Q9HD45 589 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 TMEM184CQ9NVA4 438 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 STX18Q9P2W9 335 aaKnown RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 CPNE7Q9UBL6 633 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 APOBEC3BQ9UH17 382 aaKnown RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 L3MBTL1Q9Y468 752 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 TECTAO75443 2155 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 CACNA1EQ15878 2313 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 NCOR1O75376 2440 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 DNAH14Q0VDD8 3507 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 TRBV23OR9-2A0A075B6M9 112 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 ANKDD1BA6NHY2 528 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 SCAMP2O15127 329 aaKnown RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 LCMT2O60294 686 aaKnown RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 SCN2BO60939 215 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 LRATO95237 230 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 KCNH1O95259 989 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 JUNDP17535 347 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 TCN1P20061 433 aaPredicted RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 HRH2P25021 359 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 MAOBP27338 520 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 PTPN6P29350 595 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 CMPK1P30085 196 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 HOXA6P31267 233 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 S100A3P33764 101 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 ERFP50548 548 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 ZXDAP98168 799 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 DMWDQ09019 674 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 ZNF763Q0D2J5 394 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 TRAP1Q12931 704 aaKnown RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 KIR2DS3Q14952 304 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 LRIF1Q5T3J3 769 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 DEPDC1Q5TB30 811 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 KIAA1614Q5VZ46 1190 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 SLC9B2Q86UD5 537 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 SFTPA2Q8IWL1 248 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 FAM20CQ8IXL6 584 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 OR8J3Q8NGG0 315 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 OR8J2Q8NGG1 315 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 DNAJB8Q8NHS0 232 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 WDR48Q8TAF3 677 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 DNAJB14Q8TBM8 379 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 SLC37A2Q8TED4 501 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 CREB3L4Q8TEY5 395 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 STARD8Q92502 1023 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 GFM2Q969S9 779 aaKnown RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 CGREF1Q99674 301 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 DPH7Q9BTV6 452 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 TRIM8Q9BZR9 551 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 SRMSQ9H3Y6 488 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 MYNNQ9NPC7 610 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 SLC25A37Q9NYZ2 338 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 GMPR2Q9P2T1 348 aaKnown RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 MCM8Q9UJA3 840 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 EXO1Q9UQ84 846 aaKnown RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 TMEM131Q92545 1883 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 GNG14A0A1W2PPG7 69 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 FAM221BA6H8Z2 402 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 TLR4O00206 839 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 SAP18O00422 153 aaKnown RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 PLPP1O14494 284 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 HAT1O14929 419 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 AKAP10O43572 662 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 OR1F1O43749 312 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 CLEC3AO75596 197 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 CTSEP14091 401 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 GSTM2P28161 218 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 BCL6P41182 706 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 KIR3DL1P43629 444 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 WNT3P56703 355 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 EEFSECP57772 596 aaKnown RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 CYP4F2P78329 520 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 SRSF11Q05519 484 aaKnown RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 FXNQ16595 210 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 TAF8Q7Z7C8 310 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 GPR180Q86V85 440 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 PLD3Q8IV08 490 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 TRIM48Q8IWZ4 208 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 BHLHE22Q8NFJ8 381 aaPredicted RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 TTLQ8NG68 377 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 OR7A2PQ8NGA2 310 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 DNASE2BQ8WZ79 361 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 PPM1MQ96MI6 270 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 ANKRD27Q96NW4 1050 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 REXO4Q9GZR2 422 aaKnown RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 PAIP1Q9H074 479 aaKnown RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 PCDHAC1Q9H158 963 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 DUSP15Q9H1R2 295 aaPredicted RBP9.04□□□□□ -0.96
SF3B1-211ENST00000487698 KCNH6Q9H252 994 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 S100A14Q9HCY8 104 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 SLC6A13Q9NSD5 602 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 VAPAQ9P0L0 249 aa9.04□□□□□ -0.96
SF3B1-211ENST00000487698 MAPRE3Q9UPY8 281 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms