RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 ATP5DP30049 168 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 TRHRP34981 398 aaPredicted RBP13.98□□□□□ -0.17
PFDN4-204ENST00000487129 RPA3P35244 121 aaPredicted RBP13.98□□□□□ -0.17
PFDN4-204ENST00000487129 BCL6P41182 706 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 ADAM8P78325 824 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 TAP2Q03519 686 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 MYBPHQ13203 477 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 ARHGAP19Q14CB8 494 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 ABRAXAS2Q15018 415 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 AARS2Q5JTZ9 985 aaKnown RBP13.98□□□□□ -0.17
PFDN4-204ENST00000487129 MFSD4BQ5TF39 518 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 TMEM211Q6ICI0 200 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 TMEM214Q6NUQ4 689 aaKnown RBP13.98□□□□□ -0.17
PFDN4-204ENST00000487129 RPS19BP1Q86WX3 136 aaKnown RBP13.98□□□□□ -0.17
PFDN4-204ENST00000487129 GAS2L3Q86XJ1 694 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 LRRC56Q8IYG6 542 aaPredicted RBP13.98□□□□□ -0.17
PFDN4-204ENST00000487129 ARMC10Q8N2F6 343 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 PPFIBP2Q8ND30 876 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 PLPP5Q8NEB5 264 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 C16orf52Q8NHV5 167 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 SLC35B2Q8TB61 432 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 MAGEC3Q8TD91 643 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 PEX13Q92968 403 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 CALR3Q96L12 384 aaKnown RBP13.98□□□□□ -0.17
PFDN4-204ENST00000487129 PKP4Q99569 1192 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 MACROD1Q9BQ69 325 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 CATSPERZQ9NTU4 200 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 DNAJB12Q9NXW2 375 aaKnown RBP13.98□□□□□ -0.17
PFDN4-204ENST00000487129 GALPQ9UBC7 116 aa13.98□□□□□ -0.17
PFDN4-204ENST00000487129 SGK494L7N484 410 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 NDC80O14777 642 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 KPNA5O15131 536 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 PROM1O43490 865 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 HS6ST1O60243 411 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 PSIP1O75475 530 aaKnown RBP13.97□□□□□ -0.17
PFDN4-204ENST00000487129 ZNF189O75820 626 aaPredicted RBP13.97□□□□□ -0.17
PFDN4-204ENST00000487129 TJP3O95049 919 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 ZWINTO95229 277 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 SLC16A8O95907 504 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 PPARGP37231 505 aaPredicted RBP13.97□□□□□ -0.17
PFDN4-204ENST00000487129 TTPAP49638 278 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 MEOX1P50221 254 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 ITGA8P53708 1063 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 NUP107P57740 925 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 PRAMEP78395 509 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 LTBQ06643 244 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 KLF1Q13351 362 aaPredicted RBP13.97□□□□□ -0.17
PFDN4-204ENST00000487129 NDUFA9Q16795 377 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 ANKRD20A4Q4UJ75 823 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 SPNS2Q8IVW8 549 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 SULF2Q8IWU5 870 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 ZFP62Q8NB50 900 aaPredicted RBP13.97□□□□□ -0.17
PFDN4-204ENST00000487129 POGLUT1Q8NBL1 392 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 GSDMBQ8TAX9 411 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 ZNF480Q8WV37 535 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 FOPNLQ96NB1 174 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 LPAR4Q99677 370 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 SMR3AQ99954 134 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 RBCK1Q9BYM8 510 aa13.97□□□□□ -0.17
PFDN4-204ENST00000487129 TP63Q9H3D4 680 aaPredicted RBP13.97□□□□□ -0.17
PFDN4-204ENST00000487129 PHF3Q92576 2039 aaKnown RBP13.97□□□□□ -0.17
PFDN4-204ENST00000487129 FAM237BA0A1B0GVD1 139 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 ERI2A8K979 691 aaKnown RBP13.96□□□□□ -0.17
PFDN4-204ENST00000487129 MAGEB17A8MXT2 336 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 TFECO14948 347 aaPredicted RBP13.96□□□□□ -0.17
PFDN4-204ENST00000487129 CD3EAPO15446 510 aaKnown RBP13.96□□□□□ -0.17
PFDN4-204ENST00000487129 NIPSNAP2O75323 286 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 RDH16O75452 317 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 CDC123O75794 336 aaPredicted RBP13.96□□□□□ -0.17
PFDN4-204ENST00000487129 ARNTP27540 789 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 CYB561P49447 251 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 PNLIPRP1P54315 467 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 MLF1P58340 268 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 PMPCAQ10713 525 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 NSDHLQ15738 373 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 ACSBG2Q5FVE4 666 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 LRRC6Q86X45 466 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 OR52N2Q8NGI0 321 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 TM4SF19Q96DZ7 209 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 ALPK1Q96QP1 1244 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 ETNK1Q9HBU6 452 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 CHRAC1Q9NRG0 131 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 TREX1Q9NSU2 369 aa13.96□□□□□ -0.17
PFDN4-204ENST00000487129 JMJD1CQ15652 2540 aa13.96□□□□□ -0.18
PFDN4-204ENST00000487129 KCNE1BA0A087WTH5 132 aa13.95□□□□□ -0.18
PFDN4-204ENST00000487129 TCRBV7S2A1N4TA0A589 114 aa13.95□□□□□ -0.18
PFDN4-204ENST00000487129 H7BY64 318 aa13.95□□□□□ -0.18
PFDN4-204ENST00000487129 SMAPO00193 183 aa13.95□□□□□ -0.18
PFDN4-204ENST00000487129 CDC40O60508 579 aaKnown RBP eCLIP13.95□□□□□ -0.18
PFDN4-204ENST00000487129 DNAJB6O75190 326 aa13.95□□□□□ -0.18
PFDN4-204ENST00000487129 CCNDBP1O95273 360 aa13.95□□□□□ -0.18
PFDN4-204ENST00000487129 HLCSP50747 726 aa13.95□□□□□ -0.18
PFDN4-204ENST00000487129 EIF3BP55884 814 aaKnown RBP13.95□□□□□ -0.18
PFDN4-204ENST00000487129 RWDD2BP57060 319 aa13.95□□□□□ -0.18
PFDN4-204ENST00000487129 TAS2R50P59544 299 aa13.95□□□□□ -0.18
PFDN4-204ENST00000487129 ABATP80404 500 aa13.95□□□□□ -0.18
PFDN4-204ENST00000487129 TSTA3Q13630 321 aaPredicted RBP13.95□□□□□ -0.18
PFDN4-204ENST00000487129 KCNJ11Q14654 390 aa13.95□□□□□ -0.18
PFDN4-204ENST00000487129 MPP5Q8N3R9 675 aa13.95□□□□□ -0.18
PFDN4-204ENST00000487129 KCT2Q8NC54 265 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 264.4 ms