RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 ADCK2Q7Z695 626 aa12.31□□□□□ -0.44
SSR4-211ENST00000486204 ZNF655Q8N720 491 aaPredicted RBP12.31□□□□□ -0.44
SSR4-211ENST00000486204 CT55Q8WUE5 264 aa12.31□□□□□ -0.44
SSR4-211ENST00000486204 SLC45A3Q96JT2 553 aa12.31□□□□□ -0.44
SSR4-211ENST00000486204 CABS1Q96KC9 395 aa12.31□□□□□ -0.44
SSR4-211ENST00000486204 GBP5Q96PP8 586 aa12.31□□□□□ -0.44
SSR4-211ENST00000486204 XPR1Q9UBH6 696 aa12.31□□□□□ -0.44
SSR4-211ENST00000486204 DHCR7Q9UBM7 475 aaKnown RBP12.31□□□□□ -0.44
SSR4-211ENST00000486204 CELSR2Q9HCU4 2923 aa12.31□□□□□ -0.44
SSR4-211ENST00000486204 LRBAP50851 2863 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 KCNE1BA0A087WTH5 132 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 FEZF1A0PJY2 475 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 SMIM23A6NLE4 172 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 SYCE1LA8MT33 242 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 GOLGA8RI6L899 631 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 MEN1O00255 615 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 MAP2K7O14733 419 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 LCMT2O60294 686 aaKnown RBP12.3□□□□□ -0.44
SSR4-211ENST00000486204 CDH16O75309 829 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 STK16O75716 305 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 CAPN1P07384 714 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 TUBBP07437 444 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 HBQ1P09105 142 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 NR1D1P20393 614 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 BCL6P41182 706 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 CCR8P51685 355 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 RPS15AP62244 130 aaKnown RBP12.3□□□□□ -0.44
SSR4-211ENST00000486204 REEP5Q00765 189 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 CDC20Q12834 499 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 CDC16Q13042 620 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 E2F2Q14209 437 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 GRM7Q14831 915 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 HKDC1Q2TB90 917 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 FAM199XQ6PEV8 388 aaPredicted RBP12.3□□□□□ -0.44
SSR4-211ENST00000486204 FAM198BQ6UWH4 519 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 SLCO4C1Q6ZQN7 724 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 LRRC70Q7Z2Q7 622 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 TMPRSS11BQ86T26 416 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 CNPY4Q8N129 248 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 DTWD1Q8N5C7 304 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 ZNF740Q8NDX6 193 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 ACMSDQ8TDX5 336 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 CLIP3Q96DZ5 547 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 TM4SF19Q96DZ7 209 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 C10orf90Q96M02 699 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 RUFY1Q96T51 708 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 CD244Q9BZW8 370 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 CNOT10Q9H9A5 744 aaKnown RBP12.3□□□□□ -0.44
SSR4-211ENST00000486204 PELI2Q9HAT8 420 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 DNAJC11Q9NVH1 559 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 GPRC5BQ9NZH0 403 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 TMEM216Q9P0N5 145 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 CROTQ9UKG9 612 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 PADI1Q9ULC6 663 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 DYRK1BQ9Y463 629 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 KCNE2Q9Y6J6 123 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 DOCK10Q96BY6 2186 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 CSMD1Q96PZ7 3565 aa12.3□□□□□ -0.44
SSR4-211ENST00000486204 C2CD3Q4AC94 2353 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 TRBC2A0A5B9 178 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 LRRC14BA6NHZ5 514 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 TTLL8A6PVC2 850 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 K7EM74 188 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 CLDN1O95832 211 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 S100BP04271 92 aaPredicted RBP12.29□□□□□ -0.44
SSR4-211ENST00000486204 RBP1P09455 135 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 PYGBP11216 843 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 GNAZP19086 355 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 DLSTP36957 453 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 EMP3P54852 163 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 ALDH18A1P54886 795 aaKnown RBP12.29□□□□□ -0.44
SSR4-211ENST00000486204 PDK4Q16654 411 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 YOD1Q5VVQ6 348 aaPredicted RBP12.29□□□□□ -0.44
SSR4-211ENST00000486204 C1QL3Q5VWW1 255 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 NXPE4Q6UWF7 544 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 LCA5Q86VQ0 697 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 CSNK1A1LQ8N752 337 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 CPT1CQ8TCG5 803 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 PROKR1Q8TCW9 393 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 WDR34Q96EX3 536 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 NDC1Q9BTX1 674 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 CHST8Q9H2A9 424 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 MRPL46Q9H2W6 279 aaKnown RBP12.29□□□□□ -0.44
SSR4-211ENST00000486204 GPN2Q9H9Y4 310 aaPredicted RBP12.29□□□□□ -0.44
SSR4-211ENST00000486204 SLC22A11Q9NSA0 550 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 CUTCQ9NTM9 273 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 CPSF2Q9P2I0 782 aaKnown RBP12.29□□□□□ -0.44
SSR4-211ENST00000486204 COPG2Q9UBF2 871 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 LGALS13Q9UHV8 139 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 RUVBL1Q9Y265 456 aaKnown RBP12.29□□□□□ -0.44
SSR4-211ENST00000486204 CRYBG3Q68DQ2 2970 aa12.29□□□□□ -0.44
SSR4-211ENST00000486204 A0A1B0GX78 115 aa12.28□□□□□ -0.44
SSR4-211ENST00000486204 HYKKA2RU49 373 aa12.28□□□□□ -0.44
SSR4-211ENST00000486204 K7EPI3 171 aa12.28□□□□□ -0.44
SSR4-211ENST00000486204 DSCR3O14972 297 aa12.28□□□□□ -0.44
SSR4-211ENST00000486204 CCNT2O60583 730 aaKnown RBP12.28□□□□□ -0.44
SSR4-211ENST00000486204 ONECUT2O95948 504 aa12.28□□□□□ -0.44
SSR4-211ENST00000486204 STATHP02808 62 aa12.28□□□□□ -0.44
SSR4-211ENST00000486204 EIF2S1P05198 315 aaKnown RBP12.28□□□□□ -0.44
SSR4-211ENST00000486204 CCNYL3P0C7X3 344 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms