RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TRIM33Q9UPN9 1127 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 FARSAQ9Y285 508 aaKnown RBP9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 TLN1Q9Y490 2541 aaKnown RBP9.02□□□□□ -0.96
TMEM39A-208ENST00000486159 GSAPA4D1B5 854 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 A6NL46 340 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 TMEM150CB9EJG8 249 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 MKRN2OSH3BPM6 223 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 EIF3FO00303 357 aaPredicted RBP9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 MATN2O00339 956 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 FCHO1O14526 889 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 KERAO60938 352 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 SLC35G4P0C7Q5 338 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 ATP1B2P14415 290 aaPredicted RBP9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 NQO1P15559 274 aaKnown RBP9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 CDH3P22223 829 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 PRDX6P30041 224 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 PRDX3P30048 256 aaKnown RBP9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 FMO4P31512 558 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 RORAP35398 523 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 PRLHRP49683 370 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 IDH3AP50213 366 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 NAGLUP54802 743 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 IL2P60568 153 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 HERVK_113P63132 956 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 IRX1P78414 480 aaPredicted RBP9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 TIAL1Q01085 375 aaKnown RBP eCLIP9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 ACY1Q03154 408 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 SF3A3Q12874 501 aaKnown RBP eCLIP9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 ZNF460Q14592 562 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 ZIC1Q15915 447 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 DEFB110Q30KQ9 67 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 ARL13AQ5H913 290 aaPredicted RBP9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 SH2D4BQ5SQS7 431 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 EPGNQ6UW88 154 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 ZNF517Q6ZMY9 492 aaPredicted RBP9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 LDB1Q86U70 411 aaPredicted RBP9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 SERPINA9Q86WD7 417 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 ADGRF3Q8IZF5 1079 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 DSELQ8IZU8 1212 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 NXPE1Q8N323 547 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 ZBTB2Q8N680 514 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 OR52E1Q8NGJ3 308 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 ADAMTS17Q8TE56 1095 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 HGH1Q9BTY7 390 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 ERVK-6Q9BXR3 956 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 ZCCHC2Q9C0B9 1178 aaKnown RBP9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 P2RY12Q9H244 342 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 LATS2Q9NRM7 1088 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 SOHLH2Q9NX45 425 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 SPHK1Q9NYA1 384 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 CIDEBQ9UHD4 219 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 POMT2Q9UKY4 750 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 ACSL5Q9ULC5 683 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 PLAGL1Q9UM63 463 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 DHRS7Q9Y394 339 aa9.02□□□□□ -0.97
TMEM39A-208ENST00000486159 FER1L5A0AVI2 2057 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 A8MT66 165 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 CAPN14A8MX76 684 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 C21orf140B9A014 251 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 E5RI56 91 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 ANKRD65E5RJM6 399 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 STX16-NPEPL1H3BU86 382 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 MEN1O00255 615 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 ZNF195O14628 629 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 STX16O14662 325 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 KLK8O60259 260 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 CPNE3O75131 537 aaKnown RBP9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 LYPLA1O75608 230 aaPredicted RBP9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 ZBTB11O95625 1053 aaPredicted RBP9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 F7P08709 466 aaPredicted RBP9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 CBSLP0DN79 551 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 KITP10721 976 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 ACRV1P26436 265 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 CBSP35520 551 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 NSG1P42857 185 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 CD97P48960 835 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 RGS4P49798 205 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 RPS15P62841 145 aaKnown RBP9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 CDC16Q13042 620 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 RIPK1Q13546 671 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 KRT33BQ14525 404 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 SPRED3Q2MJR0 410 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 TTLL9Q3SXZ7 439 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 C1orf189Q5VU69 101 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 ARMC6Q6NXE6 501 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 METTL2BQ6P1Q9 378 aaKnown RBP9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 TTC23LQ6PF05 361 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 FAM198BQ6UWH4 519 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 TMEM207Q6UWW9 146 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 FRMD7Q6ZUT3 714 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 ACAD11Q709F0 780 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 APLFQ8IW19 511 aaPredicted RBP9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 C10orf67Q8IYJ2 551 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 ARHGAP24Q8N264 748 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 CCNYL1Q8N7R7 359 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 FDCSPQ8NFU4 85 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 OR5AR1Q8NGP9 310 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 HM13Q8TCT9 377 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 ANKRD49Q8WVL7 239 aa9.01□□□□□ -0.97
TMEM39A-208ENST00000486159 LCN9Q8WX39 176 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms