RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 MVB12AQ96EY5 273 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 TMEM79Q9BSE2 394 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 RBCK1Q9BYM8 510 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 ATP13A2Q9NQ11 1180 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 SEMA3GQ9NS98 782 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 WWOXQ9NZC7 414 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 NINJ2Q9NZG7 142 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 ZNF451Q9Y4E5 1061 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 IGLV3-12A0A075B6K2 115 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 TRBC2A0A5B9 178 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 IDSB3KWA1 339 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 MAP2K7O14733 419 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 RDH16O75452 317 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 WISP1O95388 367 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 IGHEP01854 428 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 HEXBP07686 556 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 SLC35G6P0C7Q6 338 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 ACPPP15309 386 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 CD97P48960 835 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 EFNA3P52797 238 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 EMP2P54851 167 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 CDKL1Q00532 357 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 REEP5Q00765 189 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 DLG1Q12959 904 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 FAM53BQ14153 422 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 MYBPC3Q14896 1274 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 TGFBIQ15582 683 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 ZKSCAN8Q15776 578 aaPredicted RBP11.64□□□□□ -0.55
MSH5-216ENST00000484309 TMEM214Q6NUQ4 689 aaKnown RBP11.64□□□□□ -0.55
MSH5-216ENST00000484309 CYS1Q717R9 158 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 PDSS2Q86YH6 399 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 GPSM1Q86YR5 675 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 MNS1Q8NEH6 495 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 OR4K1Q8NGD4 311 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 TRIM44Q96DX7 344 aaPredicted RBP11.64□□□□□ -0.55
MSH5-216ENST00000484309 CDC42EP4Q9H3Q1 356 aaKnown RBP11.64□□□□□ -0.55
MSH5-216ENST00000484309 ZNF552Q9H707 407 aaPredicted RBP11.64□□□□□ -0.55
MSH5-216ENST00000484309 ZBTB20Q9HC78 741 aaPredicted RBP11.64□□□□□ -0.55
MSH5-216ENST00000484309 ZNF160Q9HCG1 818 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 ANKHQ9HCJ1 492 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 MKKSQ9NPJ1 570 aaPredicted RBP11.64□□□□□ -0.55
MSH5-216ENST00000484309 MTRF1LQ9UGC7 380 aaKnown RBP11.64□□□□□ -0.55
MSH5-216ENST00000484309 PLAAQ9Y263 795 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 MAP4K5Q9Y4K4 846 aa11.64□□□□□ -0.55
MSH5-216ENST00000484309 SPENQ96T58 3664 aaKnown RBP11.64□□□□□ -0.55
MSH5-216ENST00000484309 OR2W5A6NFC9 320 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 KIF2AO00139 706 aaPredicted RBP11.63□□□□□ -0.55
MSH5-216ENST00000484309 TAPBPO15533 448 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 DPM1O60762 260 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 KLHL18O94889 574 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 NSA2O95478 260 aaKnown RBP11.63□□□□□ -0.55
MSH5-216ENST00000484309 ACSL3O95573 720 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 SLC35E2BP0CK96 405 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 TFEBP19484 476 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 HNF4AP41235 474 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 XCR1P46094 333 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 SCTRP47872 440 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 SLC6A12P48065 614 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 HSPA7P48741 367 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 HNMTP50135 292 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 ATP6V0D1P61421 351 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 OLR1P78380 273 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 IRF9Q00978 393 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 Q0VFX4 171 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 ILF2Q12905 390 aaKnown RBP11.63□□□□□ -0.55
MSH5-216ENST00000484309 AIMP2Q13155 320 aaKnown RBP11.63□□□□□ -0.55
MSH5-216ENST00000484309 NAB1Q13506 487 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 RBBP5Q15291 538 aaKnown RBP11.63□□□□□ -0.55
MSH5-216ENST00000484309 MINDY4Q4G0A6 757 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 PRR30Q53SZ7 412 aaPredicted RBP11.63□□□□□ -0.55
MSH5-216ENST00000484309 MROH9Q5TGP6 573 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 VWA5B1Q5TIE3 1220 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 NXPE4Q6UWF7 544 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 TBC1D19Q8N5T2 526 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 RBMXL3Q8N7X1 1067 aaKnown RBP11.63□□□□□ -0.55
MSH5-216ENST00000484309 ANKRD53Q8N9V6 530 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 OR5T3Q8NGG3 340 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 KIF18AQ8NI77 898 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 UHMK1Q8TAS1 419 aaKnown RBP11.63□□□□□ -0.55
MSH5-216ENST00000484309 THOC3Q96J01 351 aaKnown RBP11.63□□□□□ -0.55
MSH5-216ENST00000484309 SMAD5Q99717 465 aaKnown RBP11.63□□□□□ -0.55
MSH5-216ENST00000484309 ALG9Q9H6U8 611 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 PELI2Q9HAT8 420 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 C14orf105Q9NVL8 296 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 CD274Q9NZQ7 290 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 MKL2Q9ULH7 1088 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 RNF112Q9ULX5 631 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 NAALAD2Q9Y3Q0 740 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 KCNE2Q9Y6J6 123 aa11.63□□□□□ -0.55
MSH5-216ENST00000484309 RP1L1Q8IWN7 2480 aaPredicted RBP11.63□□□□□ -0.55
MSH5-216ENST00000484309 TTLL8A6PVC2 850 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 H0YIG0 161 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 DNAJB6O75190 326 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 CDC123O75794 336 aaPredicted RBP11.62□□□□□ -0.55
MSH5-216ENST00000484309 BMP10O95393 424 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 S100BP04271 92 aaPredicted RBP11.62□□□□□ -0.55
MSH5-216ENST00000484309 CELA2AP08217 269 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 ZNF888P0CJ79 500 aaPredicted RBP11.62□□□□□ -0.55
MSH5-216ENST00000484309 COX6A1P12074 109 aa11.62□□□□□ -0.55
MSH5-216ENST00000484309 CXCR2P25025 360 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms