RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 SNX9Q9Y5X1 595 aa4.66□□□□□ -1.66
SSBP1-211ENST00000484178 AP1M2Q9Y6Q5 423 aa4.66□□□□□ -1.66
SSBP1-211ENST00000484178 HSPE1-MOB4S4R3N1 261 aa4.66□□□□□ -1.66
SSBP1-211ENST00000484178 SCN9AQ15858 1988 aa4.65□□□□□ -1.66
SSBP1-211ENST00000484178 PHIPQ8WWQ0 1821 aa4.65□□□□□ -1.66
SSBP1-211ENST00000484178 DOCK1Q14185 1865 aa4.65□□□□□ -1.66
SSBP1-211ENST00000484178 DOCK5Q9H7D0 1870 aa4.65□□□□□ -1.66
SSBP1-211ENST00000484178 RNF103-CHMP3A0A140T963 221 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 FAM170AA1A519 330 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 H3BSA7 217 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 M0QYT0 321 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 RAB27BO00194 218 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 PIRO00625 290 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 MPPED1O15442 326 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 CLOCKO15516 846 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 DNPH1O43598 174 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 TSPAN1O60635 241 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 E2F6O75461 281 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ZFPL1O95159 310 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 MLYCDO95822 493 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 LDLRP01130 860 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 EPOP01588 193 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 CSF1P09603 554 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 RAP2AP10114 183 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ETS2P15036 469 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ERCC2P18074 760 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ARF4P18085 180 aaPredicted RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 LBPP18428 481 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 CCNA2P20248 432 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 HTR1EP28566 365 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 EPHA3P29320 983 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 LRPAP1P30533 357 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 HOXC13P31276 330 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 RPS9P46781 194 aaKnown RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 LEPRP48357 1165 aaKnown RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 CXCR3P49682 368 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 RGS7P49802 495 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ZNF81P51508 661 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 HNRNPFP52597 415 aaKnown RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 HMGCS2P54868 508 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 HERVK_113P63132 956 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.65□□□□□ -1.672e-6■□□□□ 8.3
SSBP1-211ENST00000484178 SRSF4Q08170 494 aaKnown RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ZNF846Q147U1 533 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 RPS6KA2Q15349 733 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ATP6AP1Q15904 470 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 TRIM60Q495X7 471 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 AGKQ53H12 422 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 CCDC92Q53HC0 331 aaPredicted RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ATPAF1Q5TC12 328 aaPredicted RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 VWA5B1Q5TIE3 1220 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 C9orf57Q5W0N0 161 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 REP15Q6BDI9 236 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 PLAG1Q6DJT9 500 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 FCRL6Q6DN72 434 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 PM20D1Q6GTS8 502 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 NEPROQ6NW34 567 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 METTL2BQ6P1Q9 378 aaKnown RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 TTC23LQ6PF05 361 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 KLHL35Q6PF15 583 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 IYDQ6PHW0 289 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ALKAL1Q6UXT8 129 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 NAPRTQ6XQN6 538 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 RNF165Q6ZSG1 346 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 RAB11FIP2Q7L804 512 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ACOT1Q86TX2 421 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 CUZD1Q86UP6 607 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 DCP1BQ8IZD4 617 aaKnown RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 DEFB106AQ8N104 65 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 SVOPLQ8N434 492 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 GALNT4Q8N4A0 578 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 OR52K1Q8NGK4 314 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 CSGALNACT1Q8TDX6 532 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 CREB3L4Q8TEY5 395 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 C19orf60Q96EN9 201 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 TMA16Q96EY4 203 aaKnown RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ZNF347Q96SE7 839 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 LGMNQ99538 433 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 IL12RB2Q99665 862 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 C19orf43Q9BQ61 176 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ERVK-6Q9BXR3 956 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 UGT2B28Q9BY64 529 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 SLC29A3Q9BZD2 475 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 MS4A7Q9GZW8 240 aaPredicted RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ABHD16BQ9H3Z7 469 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 POMKQ9H5K3 350 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 TFB2MQ9H5Q4 396 aaKnown RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 WDR55Q9H6Y2 383 aaPredicted RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 SYTL2Q9HCH5 934 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 CCNB1IP1Q9NPC3 277 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 SDR39U1Q9NRG7 319 aaPredicted RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 KRT84Q9NSB2 600 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 IARS2Q9NSE4 1012 aaKnown RBP4.65□□□□□ -1.67
SSBP1-211ENST00000484178 FBXO34Q9NWN3 711 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 GPATCH2LQ9NWQ4 482 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 ARHGEF38Q9NXL2 777 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 JKAMPQ9P055 326 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 XPR1Q9UBH6 696 aa4.65□□□□□ -1.67
SSBP1-211ENST00000484178 DKK4Q9UBT3 224 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms