RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 LZTFL1Q9NQ48 299 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 CCDC177Q9NQR7 707 aaPredicted RBP13.11□□□□□ -0.31
VARS-226ENST00000483275 INTS10Q9NVR2 710 aaKnown RBP13.11□□□□□ -0.31
VARS-226ENST00000483275 UTP6Q9NYH9 597 aaKnown RBP13.11□□□□□ -0.31
VARS-226ENST00000483275 SAMD15Q9P1V8 674 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 NPIPA1Q9UND3 350 aa13.11□□□□□ -0.31
VARS-226ENST00000483275 H0YIG0 161 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 TXNDC9O14530 226 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 PFDN6O15212 129 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 DNAJB6O75190 326 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 ESRRAP11474 423 aaPredicted RBP13.1□□□□□ -0.31
VARS-226ENST00000483275 CDH1P12830 882 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 ICAM2P13598 275 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 PAMP19021 973 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 PTGER4P35408 488 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 HSD17B2P37059 387 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 SKIV2L2P42285 1042 aaKnown RBP13.1□□□□□ -0.31
VARS-226ENST00000483275 PGGT1BP53609 377 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 CSNK1G2P78368 415 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 TTLL9Q3SXZ7 439 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 ZNF468Q5VIY5 522 aaPredicted RBP13.1□□□□□ -0.31
VARS-226ENST00000483275 TTC27Q6P3X3 843 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 DRICH1Q6PGQ1 229 aaPredicted RBP13.1□□□□□ -0.31
VARS-226ENST00000483275 PAPD4Q6PIY7 484 aaKnown RBP13.1□□□□□ -0.31
VARS-226ENST00000483275 CYHR1Q6ZMK1 362 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 SLC26A11Q86WA9 606 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 ADAMTS18Q8TE60 1221 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 FRMD6Q96NE9 622 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 EBNA1BP2Q99848 306 aaKnown RBP13.1□□□□□ -0.31
VARS-226ENST00000483275 NAALAD2Q9Y3Q0 740 aa13.1□□□□□ -0.31
VARS-226ENST00000483275 ZCWPW2A0A1B0GU75 182 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 GABRR3A8MPY1 467 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 GFYI3L273 518 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 TTI1O43156 1089 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 LCMT2O60294 686 aaKnown RBP13.09□□□□□ -0.31
VARS-226ENST00000483275 CEP104O60308 925 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 MPC1LP0DKB6 136 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 KIR3DL1P43629 444 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 CASP6P55212 293 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 RPS15AP62244 130 aaKnown RBP13.09□□□□□ -0.31
VARS-226ENST00000483275 AP2B1P63010 937 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 RHAGQ02094 409 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 ALDH6A1Q02252 535 aaKnown RBP13.09□□□□□ -0.31
VARS-226ENST00000483275 OC90Q02509 493 aaPredicted RBP13.09□□□□□ -0.31
VARS-226ENST00000483275 THOC5Q13769 683 aaKnown RBP13.09□□□□□ -0.31
VARS-226ENST00000483275 PTK6Q13882 451 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 RNFT1Q5M7Z0 435 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 MTFR2Q6P444 385 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 GALNTL5Q7Z4T8 443 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.09□□□□□ -0.31
VARS-226ENST00000483275 FBXO15Q8NCQ5 510 aaPredicted RBP13.09□□□□□ -0.31
VARS-226ENST00000483275 KCNJ9Q92806 393 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 ZNF354BQ96LW1 612 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 GPR137Q96N19 417 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 UTP23Q9BRU9 249 aaKnown RBP13.09□□□□□ -0.31
VARS-226ENST00000483275 TSGA10Q9BZW7 698 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 CCDC68Q9H2F9 335 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 RUBCNLQ9H714 662 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 ANKHQ9HCJ1 492 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 CHST11Q9NPF2 352 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 C20orf96Q9NUD7 363 aaPredicted RBP13.09□□□□□ -0.31
VARS-226ENST00000483275 TMEM184CQ9NVA4 438 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 SLC17A6Q9P2U8 582 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 C19orf25Q9UFG5 118 aaPredicted RBP13.09□□□□□ -0.31
VARS-226ENST00000483275 MAP1AP78559 2803 aaPredicted RBP13.09□□□□□ -0.31
VARS-226ENST00000483275 ITPR3Q14573 2671 aa13.09□□□□□ -0.31
VARS-226ENST00000483275 AP3B1O00203 1094 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 HAUS5O94927 633 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 EEF1DP29692 281 aaKnown RBP13.08□□□□□ -0.32
VARS-226ENST00000483275 RFC3P40938 356 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 CDK16Q00536 496 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 NAE1Q13564 534 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 USP10Q14694 798 aaKnown RBP13.08□□□□□ -0.32
VARS-226ENST00000483275 NSDHLQ15738 373 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 PHKG1Q16816 387 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 MEP1AQ16819 746 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 H3F3CQ6NXT2 135 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 C4orf22Q6V702 233 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 ASPGQ86U10 573 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 SIAH3Q8IW03 269 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 CHERPQ8IWX8 916 aaKnown RBP13.08□□□□□ -0.32
VARS-226ENST00000483275 EEF1AKMT1Q8WVE0 214 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 SCMH1Q96GD3 660 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 LANCL2Q9NS86 450 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 PDE10AQ9Y233 779 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 MEMO1Q9Y316 297 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 DHRS7Q9Y394 339 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 MAD1L1Q9Y6D9 718 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 ZFHX3Q15911 3703 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 SPG11Q96JI7 2443 aa13.08□□□□□ -0.32
VARS-226ENST00000483275 INTS1Q8N201 2190 aaKnown RBP13.07□□□□□ -0.32
VARS-226ENST00000483275 ZNF407Q9C0G0 2248 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 FAM237BA0A1B0GVD1 139 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 CTAGE15A4D2H0 777 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 NDUFS4O43181 175 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 ZBTB14O43829 449 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 BANF1O75531 89 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 NEURL1O76050 574 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 KRT14P02533 472 aa13.07□□□□□ -0.32
VARS-226ENST00000483275 SERPIND1P05546 499 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms