RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 YWHAEP62258 255 aaKnown RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 RAE1P78406 368 aaKnown RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 COL10A1Q03692 680 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 FOLH1Q04609 750 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 CACNG1Q06432 222 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 ENPEPQ07075 957 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 SIGLEC14Q08ET2 396 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 DMP1Q13316 513 aaPredicted RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 CASP8Q14790 479 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 ANKRD55Q3KP44 614 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 TEX44Q53QW1 395 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 SPANXN2Q5MJ10 180 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 SAPCD1Q5SSQ6 148 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 THEM4Q5T1C6 240 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 LRIF1Q5T3J3 769 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 WLSQ5T9L3 541 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 HIST2H2BCQ6DN03 193 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 HIST2H2BDQ6DRA6 164 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 TWF2Q6IBS0 349 aaKnown RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 SLC25A25Q6KCM7 469 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 CCDC137Q6PK04 289 aaKnown RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 BLOC1S2Q6QNY1 142 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 VSTM1Q6UX27 236 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 C16orf89Q6UX73 402 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 DLEU7Q6UYE1 221 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 DCDC5Q6ZRR9 648 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 COLCA1Q6ZS62 124 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 ZBTB49Q6ZSB9 765 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 MOB3CQ70IA8 216 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 BZW1Q7L1Q6 419 aaKnown RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 ECHDC2Q86YB7 292 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 MAP7D3Q8IWC1 876 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 SMYD1Q8NB12 490 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 TRPV3Q8NET8 790 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 OR4K14Q8NGD5 310 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 OR9K2Q8NGE7 335 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 SLC2A14Q8TDB8 520 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 KCNJ9Q92806 393 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 TANKQ92844 425 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 OPTNQ96CV9 577 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 REPS1Q96D71 796 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 ARHGEF26Q96DR7 871 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 SPDL1Q96EA4 605 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 CHMP6Q96FZ7 201 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 PPP1R36Q96LQ0 422 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 CCDC17Q96LX7 622 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 NPY6RQ99463 290 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 MACROD1Q9BQ69 325 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 ZNF559Q9BR84 538 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 HAUS8Q9BT25 410 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 ADGRE3Q9BY15 652 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 PPIL3Q9H2H8 161 aaKnown RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 KLK15Q9H2R5 256 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 SLCO5A1Q9H2Y9 848 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 RGCCQ9H4X1 137 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 RAB9BQ9NP90 201 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 IL17RBQ9NRM6 502 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 TMEM161AQ9NX61 479 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 ASIC5Q9NY37 505 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 RDH8Q9NYR8 311 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 ERVK-18Q9QC07 812 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 ATXN10Q9UBB4 475 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 PISDQ9UG56 409 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 ADAM21Q9UKJ8 722 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 PCDHA7Q9UN72 937 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 A4GNTQ9UNA3 340 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 SNX7Q9UNH6 387 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 MGAT4BQ9UQ53 548 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 MRPS33Q9Y291 106 aaKnown RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 BZW2Q9Y6E2 419 aaKnown RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 AK9Q5TCS8 1911 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 ARHGEF17Q96PE2 2063 aaPredicted RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 TBC1D3DA0A087WVF3 549 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TBC1D3IA0A087WXS9 549 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TBC1D3EA0A087X179 549 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TBC1D3KA0A087X1G2 549 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TBC1D3BA6NDS4 549 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TBC1D3FA6NER0 549 aaPredicted RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 TCP11X1B4DZS4 312 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 TBC1D3LB9A6J9 549 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 KLRF2D3W0D1 207 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 F8W810 466 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 H3BQ06 376 aaPredicted RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 CLIC1O00299 241 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 POLR1CO15160 346 aaPredicted RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 MAGEB2O15479 319 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 MOCS3O95396 460 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 APOA1P02647 267 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 CAPN1P07384 714 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 CHRM5P08912 532 aaPredicted RBP3.94□□□□□ -1.78
VPS41-212ENST00000482217 TBC1D3HP0C7X1 549 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 STAG3L1P0CL83 205 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 F3P13726 295 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 B4GALT1P15291 398 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 PFKFB1P16118 471 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 GJA1P17302 382 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 UGT1A1P22309 533 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 HOXC9P31274 260 aa3.94□□□□□ -1.78
VPS41-212ENST00000482217 ADRA1AP35348 466 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms