RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 NAB1Q13506 487 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 RCN2Q14257 317 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 PHKG1Q16816 387 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.84□□□□□ -0.67
CCM2-213ENST00000480658 PLEKHN1Q494U1 663 aaPredicted RBP10.84□□□□□ -0.67
CCM2-213ENST00000480658 PLAG1Q6DJT9 500 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 SBSNQ6UWP8 590 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 VN1R4Q7Z5H5 301 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 ZC3H7AQ8IWR0 971 aaKnown RBP10.84□□□□□ -0.67
CCM2-213ENST00000480658 PARP9Q8IXQ6 854 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 HORMAD2Q8N7B1 307 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 ARMC2Q8NEN0 867 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 OR51Q1Q8NH59 317 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 NT5CQ8TCD5 201 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 HAS2Q92819 552 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 ALKBH8Q96BT7 664 aaKnown RBP10.84□□□□□ -0.67
CCM2-213ENST00000480658 CNDP1Q96KN2 507 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 KRT12Q99456 494 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 CPNE1Q99829 537 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 EGFL8Q99944 293 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 DERL2Q9GZP9 239 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 GPAMQ9HCL2 828 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 GPRC5BQ9NZH0 403 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 SLC5A6Q9Y289 635 aa10.84□□□□□ -0.67
CCM2-213ENST00000480658 USP27XA6NNY8 438 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 PSMD12O00232 456 aaPredicted RBP10.83□□□□□ -0.68
CCM2-213ENST00000480658 P2RX6O15547 441 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 OR1F1O43749 312 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 H2AFYO75367 372 aaKnown RBP10.83□□□□□ -0.68
CCM2-213ENST00000480658 GUCA1CO95843 209 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 CRYABP02511 175 aaKnown RBP10.83□□□□□ -0.68
CCM2-213ENST00000480658 STMN1P16949 149 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 ALOX12P18054 663 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 CASQ1P31415 396 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 STX2P32856 288 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 SOX11P35716 441 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 YBX1P67809 324 aaKnown RBP10.83□□□□□ -0.68
CCM2-213ENST00000480658 TIAL1Q01085 375 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCM2-213ENST00000480658 CKAP4Q07065 602 aaKnown RBP10.83□□□□□ -0.68
CCM2-213ENST00000480658 PPP1R3AQ16821 1122 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 TRMT10BQ6PF06 316 aaKnown RBP10.83□□□□□ -0.68
CCM2-213ENST00000480658 CPEB2Q7Z5Q1 589 aaKnown RBP10.83□□□□□ -0.68
CCM2-213ENST00000480658 CUZD1Q86UP6 607 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 IGDCC3Q8IVU1 814 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 PRSS58Q8IYP2 241 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 CNPY4Q8N129 248 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 LGI4Q8N135 537 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 KRT78Q8N1N4 520 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 SLC5A8Q8N695 610 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 SPATA4Q8NEY3 305 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 OR9A4Q8NGU2 314 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 ZNF354BQ96LW1 612 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 C5orf34Q96MH7 638 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 LPAR4Q99677 370 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 TRIM51Q9BSJ1 452 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 TRIM31Q9BZY9 425 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 TSPYL1Q9H0U9 437 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 EHD1Q9H4M9 534 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 CTNNAL1Q9UBT7 734 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 NAALAD2Q9Y3Q0 740 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 PCDHGB6Q9Y5F9 930 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 FER1L5A0AVI2 2057 aa10.83□□□□□ -0.68
CCM2-213ENST00000480658 SNRNP200O75643 2136 aaKnown RBP10.82□□□□□ -0.68
CCM2-213ENST00000480658 MAGEB17A8MXT2 336 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 BANF1O75531 89 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 KLHL18O94889 574 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 MED26O95402 600 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 CBX6O95503 412 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 S100BP04271 92 aaPredicted RBP10.82□□□□□ -0.68
CCM2-213ENST00000480658 FHP07954 510 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 SERPINA6P08185 405 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 IL1RNP18510 177 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 SPRP35270 261 aaPredicted RBP10.82□□□□□ -0.68
CCM2-213ENST00000480658 GP5P40197 560 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 RPL21P46778 160 aaKnown RBP10.82□□□□□ -0.68
CCM2-213ENST00000480658 UQCRFS1P47985 274 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 TNFSF10P50591 281 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 REEP5Q00765 189 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 EEF1A2Q05639 463 aaKnown RBP10.82□□□□□ -0.68
CCM2-213ENST00000480658 TGM3Q08188 693 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 NR6A1Q15406 480 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 NSDHLQ15738 373 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 PAGE2BQ5JRK9 111 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 LINC00696Q6ZRV3 163 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 THOC6Q86W42 341 aaKnown RBP10.82□□□□□ -0.68
CCM2-213ENST00000480658 PLD3Q8IV08 490 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 ANKMY2Q8IV38 441 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 AFAP1L2Q8N4X5 818 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 CISD2Q8N5K1 135 aaKnown RBP10.82□□□□□ -0.68
CCM2-213ENST00000480658 PRR7Q8TB68 274 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 M1APQ8TC57 530 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 BRIX1Q8TDN6 353 aaKnown RBP10.82□□□□□ -0.68
CCM2-213ENST00000480658 FAR1Q8WVX9 515 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 NEIL2Q969S2 332 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 TBC1D20Q96BZ9 403 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 C8orf44Q96CB5 159 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 FAR2Q96K12 515 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 PSMG3-AS1Q96PY0 264 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 CYTH2Q99418 400 aa10.82□□□□□ -0.68
CCM2-213ENST00000480658 OLFM1Q99784 485 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms