RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 C19orf25Q9UFG5 118 aaPredicted RBP17.78■□□□□ 0.44
ABCF3-214ENST00000480562 MYO7BQ6PIF6 2116 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 ZNF860A6NHJ4 632 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 PGGT1BP53609 377 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 DHX9Q08211 1270 aaKnown RBP17.77■□□□□ 0.44
ABCF3-214ENST00000480562 SP140Q13342 867 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 PPP1R7Q15435 360 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 ZXDCQ2QGD7 858 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-214ENST00000480562 MSS51Q4VC12 460 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 PLAG1Q6DJT9 500 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 CAPN13Q6MZZ7 669 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-214ENST00000480562 LRRC8EQ6NSJ5 796 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 MYO1HQ8N1T3 1032 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 GRK7Q8WTQ7 553 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 RELTQ969Z4 430 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 SGPP1Q9BX95 441 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 ABI3Q9P2A4 366 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 TEKT2Q9UIF3 430 aa17.77■□□□□ 0.44
ABCF3-214ENST00000480562 SCN2AQ99250 2005 aa17.77■□□□□ 0.43
ABCF3-214ENST00000480562 TRGV8A0A0C4DH27 118 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 SLC16A5O15375 505 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 CDC123O75794 336 aaPredicted RBP17.76■□□□□ 0.43
ABCF3-214ENST00000480562 WISP2O76076 250 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 CRYABP02511 175 aaKnown RBP17.76■□□□□ 0.43
ABCF3-214ENST00000480562 CYC1P08574 325 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 NPPBP16860 134 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 FNTAP49354 379 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 MEF2AQ02078 507 aaPredicted RBP17.76■□□□□ 0.43
ABCF3-214ENST00000480562 SP5Q6BEB4 398 aaPredicted RBP17.76■□□□□ 0.43
ABCF3-214ENST00000480562 LCTLQ6UWM7 567 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 TMEM207Q6UWW9 146 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 TICAM1Q8IUC6 712 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 IGDCC3Q8IVU1 814 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 SRRM1Q8IYB3 904 aaKnown RBP17.76■□□□□ 0.43
ABCF3-214ENST00000480562 SLC34A3Q8N130 599 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 BEST3Q8N1M1 668 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 MFSD9Q8NBP5 474 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 DNAJB8Q8NHS0 232 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 MARVELD3Q96A59 401 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 PYCR2Q96C36 320 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 PEX11GQ96HA9 241 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 OSBPL9Q96SU4 736 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 KCNK13Q9HB14 408 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 COPG2Q9UBF2 871 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 SEC14L3Q9UDX4 400 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 ENTPD4Q9Y227 616 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 NAALAD2Q9Y3Q0 740 aa17.76■□□□□ 0.43
ABCF3-214ENST00000480562 PRSS44E7EML9 344 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 NRDCO43847 1150 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 AHSGP02765 367 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 HIST1H2AGP0C0S8 130 aaPredicted RBP17.75■□□□□ 0.43
ABCF3-214ENST00000480562 HIST1H2ADP20671 130 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 GRK3P35626 688 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 SFT2D3Q587I9 215 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 ZNF766Q5HY98 468 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 ACER2Q5QJU3 275 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 SLC35F6Q8N357 371 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 OR5T3Q8NGG3 340 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 ACTRT1Q8TDG2 376 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 TSLPQ969D9 159 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 MOCOSQ96EN8 888 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 HIST1H2AHQ96KK5 128 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 ZNF354BQ96LW1 612 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 HIST1H2AJQ99878 128 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 H2AFJQ9BTM1 129 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 ANKRD10Q9NXR5 420 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 ARL15Q9NXU5 204 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 ASIC3Q9UHC3 531 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 SH3BGRL2Q9UJC5 107 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 ABCA12Q86UK0 2595 aa17.75■□□□□ 0.43
ABCF3-214ENST00000480562 GOLGA6L10A0A0M3HER8 536 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 ENO4A6NNW6 628 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 DNALI1O14645 258 aaPredicted RBP17.74■□□□□ 0.43
ABCF3-214ENST00000480562 HNRNPRO43390 633 aaKnown RBP17.74■□□□□ 0.43
ABCF3-214ENST00000480562 OR1F1O43749 312 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 MAN1A2O60476 641 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 DNAJB6O75190 326 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 TTC4O95801 387 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 TSPAN12O95859 305 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 B3GALT4O96024 378 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 SLC35G6P0C7Q6 338 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 MYBL2P10244 700 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 PRF1P14222 555 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 CCND1P24385 295 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 AGTR2P50052 363 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 CCR8P51685 355 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 RHAGQ02094 409 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 ACTN3Q08043 901 aaPredicted RBP17.74■□□□□ 0.43
ABCF3-214ENST00000480562 TUBA3CQ13748 450 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 ABRAXAS2Q15018 415 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 BBS9Q3SYG4 887 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 SPANXN3Q5MJ09 141 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 HP1BP3Q5SSJ5 553 aaPredicted RBP17.74■□□□□ 0.43
ABCF3-214ENST00000480562 H3F3CQ6NXT2 135 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 TUBA3EQ6PEY2 450 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 PAPD4Q6PIY7 484 aaKnown RBP17.74■□□□□ 0.43
ABCF3-214ENST00000480562 CRLF3Q8IUI8 442 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 CNTN4Q8IWV2 1026 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 ZNF740Q8NDX6 193 aa17.74■□□□□ 0.43
ABCF3-214ENST00000480562 SIGLEC12Q96PQ1 595 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms