RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 XKR6Q5GH73 641 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 GARNL3Q5VVW2 1013 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 GTF2H2CQ6P1K8 395 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 SLC22A9Q8IVM8 553 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 KRT78Q8N1N4 520 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 RDH11Q8TC12 318 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 GBP5Q96PP8 586 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 SMC6Q96SB8 1091 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 NLNQ9BYT8 704 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 TXLNGQ9NUQ3 528 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 ZFP69BQ9UJL9 534 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 PCTPQ9UKL6 214 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 RUVBL1Q9Y265 456 aaKnown RBP25.53■■□□□ 1.68
CCM2-211ENST00000478582 PLLPQ9Y342 182 aa25.53■■□□□ 1.68
CCM2-211ENST00000478582 G3V2L1 256 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 DSCR3O14972 297 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 P2RX6O15547 441 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 RPS17P08708 135 aaKnown RBP25.52■■□□□ 1.68
CCM2-211ENST00000478582 PRKAA2P54646 552 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 PWP1Q13610 501 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 SLBPQ14493 270 aaKnown RBP eCLIP25.52■■□□□ 1.68
CCM2-211ENST00000478582 HKDC1Q2TB90 917 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 TMIGD1Q6UXZ0 262 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 GOLGA7Q7Z5G4 137 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 ASPGQ86U10 573 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 CAMKVQ8NCB2 501 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 SLC13A3Q8WWT9 602 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 SEC16BQ96JE7 1060 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 FAM117AQ9C073 453 aa25.52■■□□□ 1.68
CCM2-211ENST00000478582 AKIRIN1Q9H9L7 192 aaPredicted RBP25.52■■□□□ 1.68
CCM2-211ENST00000478582 DHCR7Q9UBM7 475 aaKnown RBP25.52■■□□□ 1.68
CCM2-211ENST00000478582 A0A1B0GX78 115 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 ONECUT2O95948 504 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 LIFP15018 202 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 CD22P20273 847 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 IMPDH1P20839 514 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 GSTM2P28161 218 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 HERVK_113P63132 956 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 MUM1Q2TAK8 710 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 PAGE2BQ5JRK9 111 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 ZYG11AQ6WRX3 759 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 TTLL10Q6ZVT0 673 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 ANKRD53Q8N9V6 530 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 CCDC126Q96EE4 140 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 ERVK-6Q9BXR3 956 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 IPPKQ9H8X2 491 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 SPTBP11277 2137 aa25.51■■□□□ 1.67
CCM2-211ENST00000478582 LOC101059948A0A1B0GTJ6 334 aa25.5■■□□□ 1.67
CCM2-211ENST00000478582 TERTO14746 1132 aaKnown RBP25.5■■□□□ 1.67
CCM2-211ENST00000478582 UGDHO60701 494 aa25.5■■□□□ 1.67
CCM2-211ENST00000478582 AGXTP21549 392 aa25.5■■□□□ 1.67
CCM2-211ENST00000478582 MDC1Q14676 2089 aaKnown RBP25.5■■□□□ 1.67
CCM2-211ENST00000478582 RBBP5Q15291 538 aaKnown RBP25.5■■□□□ 1.67
CCM2-211ENST00000478582 LIPJQ5W064 366 aa25.5■■□□□ 1.67
CCM2-211ENST00000478582 TRPV3Q8NET8 790 aa25.5■■□□□ 1.67
CCM2-211ENST00000478582 TTLQ8NG68 377 aa25.5■■□□□ 1.67
CCM2-211ENST00000478582 NT5CQ8TCD5 201 aa25.5■■□□□ 1.67
CCM2-211ENST00000478582 ZNF483Q8TF39 744 aaPredicted RBP25.5■■□□□ 1.67
CCM2-211ENST00000478582 MR1Q95460 341 aa25.5■■□□□ 1.67
CCM2-211ENST00000478582 L3HYPDHQ96EM0 354 aa25.5■■□□□ 1.67
CCM2-211ENST00000478582 C10orf90Q96M02 699 aa25.5■■□□□ 1.67
CCM2-211ENST00000478582 IQCGQ9H095 443 aaKnown RBP25.5■■□□□ 1.67
CCM2-211ENST00000478582 SSU72Q9NP77 194 aaKnown RBP25.5■■□□□ 1.67
CCM2-211ENST00000478582 ZNF490Q9ULM2 529 aaPredicted RBP25.5■■□□□ 1.67
CCM2-211ENST00000478582 ACTL7BQ9Y614 415 aa25.5■■□□□ 1.67
CCM2-211ENST00000478582 MED26O95402 600 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 PRB1P04280 392 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 SLC35G6P0C7Q6 338 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 MYL2P10916 166 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 ALAS2P22557 587 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 DCDP81605 110 aaKnown RBP25.49■■□□□ 1.67
CCM2-211ENST00000478582 FAM53BQ14153 422 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 HIST2H2ACQ16777 129 aaPredicted RBP25.49■■□□□ 1.67
CCM2-211ENST00000478582 NDUFA9Q16795 377 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 ZNF678Q5SXM1 525 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 HIST2H2AA3Q6FI13 130 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 FAM199XQ6PEV8 388 aaPredicted RBP25.49■■□□□ 1.67
CCM2-211ENST00000478582 EXOC3L1Q86VI1 746 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 L3MBTL4Q8NA19 623 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 KIAA1143Q96AT1 154 aaPredicted RBP25.49■■□□□ 1.67
CCM2-211ENST00000478582 MVB12AQ96EY5 273 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 EFHD1Q9BUP0 239 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 NTMT1Q9BV86 223 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 CHST8Q9H2A9 424 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 C12orf65Q9H3J6 166 aaKnown RBP25.49■■□□□ 1.67
CCM2-211ENST00000478582 ZBTB26Q9HCK0 441 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 MID2Q9UJV3 735 aa25.49■■□□□ 1.67
CCM2-211ENST00000478582 C21orf140B9A014 251 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 OR7A17O14581 309 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 TYROBPO43914 113 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 ITGB2P05107 769 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 CPA3P15088 417 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 CREB1P16220 341 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 HNF4AP41235 474 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 UNC50Q53HI1 259 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 C1orf189Q5VU69 101 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 GRHL2Q6ISB3 625 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 LCN10Q6JVE6 187 aa25.48■■□□□ 1.67
CCM2-211ENST00000478582 TMEM214Q6NUQ4 689 aaKnown RBP25.48■■□□□ 1.67
CCM2-211ENST00000478582 PRMT9Q6P2P2 845 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms