RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ALKBH8Q96BT7 664 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 LRRC39Q96DD0 335 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 CERS2Q96G23 380 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 IMMP1LQ96LU5 166 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 CYTH2Q99418 400 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 SGPP1Q9BX95 441 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 STMN3Q9NZ72 180 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 HCN3Q9P1Z3 774 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 SNX12Q9UMY4 172 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 ENO4A6NNW6 628 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 CDK2AP1O14519 115 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 SNRNP200O75643 2136 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 SEC24DO94855 1032 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 WDPCPO95876 746 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 ITGAMP11215 1152 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 CDH1P12830 882 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 ACTN3Q08043 901 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 PWP1Q13610 501 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 ZRSR2Q15696 482 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 BBS9Q3SYG4 887 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 FAM45BPQ6NSW5 357 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 PAQR3Q6TCH7 311 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 TMEM207Q6UWW9 146 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 ABHD13Q7L211 337 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 MFSD9Q8NBP5 474 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 FAM98AQ8NCA5 519 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 FAM45AQ8TCE6 357 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 LPAR4Q99677 370 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 MESP1Q9BRJ9 268 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 ATG10Q9H0Y0 220 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 CLK4Q9HAZ1 481 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 PLA2G3Q9NZ20 509 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 PCDHGB6Q9Y5F9 930 aa13.65□□□□□ -0.22
SMARCE1-209ENST00000478349 A8MUI8 341 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 SGK494L7N484 410 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 NDUFS4O43181 175 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 HNRNPRO43390 633 aaKnown RBP13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 MEF2AQ02078 507 aaPredicted RBP13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 CSHL1Q14406 222 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 MORF4L2Q15014 288 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 ABRAXAS2Q15018 415 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 NSDHLQ15738 373 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 MEP1AQ16819 746 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 STRA8Q7Z7C7 330 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 LGI4Q8N135 537 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 SLC35F6Q8N357 371 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 ABHD11Q8NFV4 315 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 M1APQ8TC57 530 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 TM4SF19Q96DZ7 209 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 SARGQ9BW04 601 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 SYNPO2LQ9H987 977 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 KCNK13Q9HB14 408 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 SEC14L3Q9UDX4 400 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 ADAMTS6Q9UKP5 1117 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 ENTPD4Q9Y227 616 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 NAALAD2Q9Y3Q0 740 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 DYRK1BQ9Y463 629 aa13.64□□□□□ -0.23
SMARCE1-209ENST00000478349 HIVEP3Q5T1R4 2406 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 TRBC2A0A5B9 178 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 FEZF1A0PJY2 475 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 MAGEB17A8MXT2 336 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 TTI1O43156 1089 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 OR1F1O43749 312 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 RDH16O75452 317 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 STATHP02808 62 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 F7P08709 466 aaPredicted RBP13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 CDKN2DP55273 166 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 ARL4CP56559 192 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 PHKG1Q16816 387 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 KCTD19Q17RG1 926 aaPredicted RBP13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 ZNF766Q5HY98 468 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 ACER2Q5QJU3 275 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 ZNF324BQ6AW86 544 aaPredicted RBP13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 ZNF787Q6DD87 383 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 RPTNQ6XPR3 784 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 ANKRD37Q7Z713 158 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 FJX1Q86VR8 437 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 SLC26A11Q86WA9 606 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 AGGF1Q8N302 714 aaeCLIP13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 TMEM178AQ8NBL3 297 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 ARMC2Q8NEN0 867 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 TRPV3Q8NET8 790 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 RELTQ969Z4 430 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 FBXL8Q96CD0 374 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 SNF8Q96H20 258 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 VPS39Q96JC1 886 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 UTP23Q9BRU9 249 aaKnown RBP13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 MMP25Q9NPA2 562 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 NSMCE4AQ9NXX6 385 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 ZFATQ9P243 1243 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 COPG2Q9UBF2 871 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 TEX15Q9BXT5 2789 aa13.63□□□□□ -0.23
SMARCE1-209ENST00000478349 ANKRD12Q6UB98 2062 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 TRGV8A0A0C4DH27 118 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 PSMD12O00232 456 aaPredicted RBP13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 ZG16O60844 167 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 UNC5CO95185 931 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 AHSGP02765 367 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 SERPIND1P05546 499 aa13.62□□□□□ -0.23
SMARCE1-209ENST00000478349 CELA2AP08217 269 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms