RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 THEMIS2Q5TEJ8 643 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 MEI1Q5TIA1 1274 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 ARMC3Q5W041 872 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 TMEM214Q6NUQ4 689 aaKnown RBP9.09□□□□□ -0.95
CCM2-210ENST00000478169 GALNTL5Q7Z4T8 443 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 VN1R4Q7Z5H5 301 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.09□□□□□ -0.95
CCM2-210ENST00000478169 PRUNE1Q86TP1 453 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 SLC13A5Q86YT5 568 aaPredicted RBP9.09□□□□□ -0.95
CCM2-210ENST00000478169 PLD3Q8IV08 490 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 REXO1L1PQ8IX06 675 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 LRRC56Q8IYG6 542 aaPredicted RBP9.09□□□□□ -0.95
CCM2-210ENST00000478169 CAMKVQ8NCB2 501 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 PPFIBP2Q8ND30 876 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 PLPP5Q8NEB5 264 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 CA5BP1Q8WTZ4 195 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 C1orf54Q8WWF1 131 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 ASB11Q8WXH4 323 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 FAM136AQ96C01 138 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 PRAP1Q96NZ9 151 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 OR1F2PQ96R84 312 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 LPAR4Q99677 370 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 OLFM1Q99784 485 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 FAM129AQ9BZQ8 928 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 TSPAN10Q9H1Z9 355 aaPredicted RBP9.09□□□□□ -0.95
CCM2-210ENST00000478169 ANKHQ9HCJ1 492 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 COQ3Q9NZJ6 369 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 LRFN1Q9P244 771 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 KLHL42Q9P2K6 505 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 GALPQ9UBC7 116 aa9.09□□□□□ -0.95
CCM2-210ENST00000478169 OR2W5A6NFC9 320 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 MAGEB17A8MXT2 336 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 GOLGA8KD6RF30 607 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 GOLGA8TH3BQL2 631 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 GFYI3L273 518 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 SGK494L7N484 410 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 ADAM10O14672 748 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 ZBTB14O43829 449 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 NME2P1O60361 137 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 MAN1A2O60476 641 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 SYF2O95926 243 aaKnown RBP9.08□□□□□ -0.96
CCM2-210ENST00000478169 MPC1LP0DKB6 136 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 ENO3P13929 434 aaPredicted RBP9.08□□□□□ -0.96
CCM2-210ENST00000478169 CD1EP15812 388 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 ZNF24P17028 368 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 IL1RNP18510 177 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 NME2P22392 152 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 MGAT1P26572 445 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 CLCN7P51798 805 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 MPP1Q00013 466 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 CDK16Q00536 496 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 SNX1Q13596 522 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 USP10Q14694 798 aaKnown RBP9.08□□□□□ -0.96
CCM2-210ENST00000478169 NSDHLQ15738 373 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 MAPKAPK3Q16644 382 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 KIAA0930Q6ICG6 404 aaPredicted RBP9.08□□□□□ -0.96
CCM2-210ENST00000478169 PAPD4Q6PIY7 484 aaKnown RBP9.08□□□□□ -0.96
CCM2-210ENST00000478169 MEX3BQ6ZN04 569 aaKnown RBP9.08□□□□□ -0.96
CCM2-210ENST00000478169 CENPUQ71F23 418 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 PRSS41Q7RTY9 318 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 CILP2Q8IUL8 1156 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 CHERPQ8IWX8 916 aaKnown RBP9.08□□□□□ -0.96
CCM2-210ENST00000478169 SDCCAG3Q96C92 435 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 TM4SF19Q96DZ7 209 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 TSGA10Q9BZW7 698 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 PCBD2Q9H0N5 130 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 TRIM45Q9H8W5 580 aaPredicted RBP9.08□□□□□ -0.96
CCM2-210ENST00000478169 ABCF3Q9NUQ8 709 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 INTS10Q9NVR2 710 aaKnown RBP9.08□□□□□ -0.96
CCM2-210ENST00000478169 SYBUQ9NX95 663 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 HCN3Q9P1Z3 774 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 PPT2Q9UMR5 302 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 SOX13Q9UN79 622 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 ASB1Q9Y576 335 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 SLC22A7Q9Y694 548 aa9.08□□□□□ -0.96
CCM2-210ENST00000478169 FOXO6A8MYZ6 492 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 NDC80O14777 642 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 SLC25A12O75746 678 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 STATHP02808 62 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 ZSCAN5DPP0CG00 497 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 PAMP19021 973 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 IMPA1P29218 277 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 CYB561P49447 251 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 SLC26A5P58743 744 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 BASP1P80723 227 aaKnown RBP9.07□□□□□ -0.96
CCM2-210ENST00000478169 RHAGQ02094 409 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 ABRAXAS2Q15018 415 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 RPS6KA1Q15418 735 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 CCNG2Q16589 344 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 RNFT1Q5M7Z0 435 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 TMEM211Q6ICI0 200 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 NEPROQ6NW34 567 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 DRICH1Q6PGQ1 229 aaPredicted RBP9.07□□□□□ -0.96
CCM2-210ENST00000478169 CES3Q6UWW8 571 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 CYHR1Q6ZMK1 362 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 NCCRP1Q6ZVX7 275 aaPredicted RBP9.07□□□□□ -0.96
CCM2-210ENST00000478169 RPS19BP1Q86WX3 136 aaKnown RBP9.07□□□□□ -0.96
CCM2-210ENST00000478169 SHISA5Q8N114 240 aa9.07□□□□□ -0.96
CCM2-210ENST00000478169 RNF10Q8N5U6 811 aaKnown RBP9.07□□□□□ -0.96
CCM2-210ENST00000478169 PRELID2Q8N945 189 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms