RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 R3HCC1LQ7Z5L2 792 aaKnown RBP4.41□□□□□ -1.7
VPS50-214ENST00000477935 ODF3L1Q8IXM7 274 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 CCDC13Q8IYE1 715 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 METTL6Q8TCB7 284 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 LRRC15Q8TF66 581 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 PRCCQ92733 491 aaPredicted RBP4.41□□□□□ -1.7
VPS50-214ENST00000477935 SIPA1Q96FS4 1042 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 CCDC43Q96MW1 224 aaKnown RBP4.41□□□□□ -1.7
VPS50-214ENST00000477935 ZMAT2Q96NC0 199 aaKnown RBP4.41□□□□□ -1.7
VPS50-214ENST00000477935 TSPAN18Q96SJ8 248 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 PIP5K1AQ99755 562 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 LXNQ9BS40 222 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 C1QTNF5Q9BXJ0 243 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 ABCG4Q9H172 646 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 ERVMER34-1Q9H9K5 563 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 TRPC7Q9HCX4 862 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 EHD2Q9NZN4 543 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 ADGRG4Q8IZF6 3080 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 PDZD2O15018 2839 aa4.4□□□□□ -1.7
VPS50-214ENST00000477935 NPIPB15A6NHN6 443 aaPredicted RBP4.4□□□□□ -1.71
VPS50-214ENST00000477935 CDRT15L2A8MXV6 281 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 EIF3CLB5ME19 914 aaKnown RBP4.4□□□□□ -1.71
VPS50-214ENST00000477935 VCYO14598 125 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 SYNCRIPO60506 623 aaKnown RBP4.4□□□□□ -1.71
VPS50-214ENST00000477935 CSO75390 466 aaKnown RBP4.4□□□□□ -1.71
VPS50-214ENST00000477935 NOL4O94818 638 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 SLITRK3O94933 977 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 IGLV2-11P01706 119 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 ODC1P11926 461 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 HLA-DOBP13765 273 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 NAMPTP43490 491 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 SLC7A9P82251 487 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 IL9RQ01113 521 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 ACSM2AQ08AH3 577 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 ARL16Q0P5N6 197 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 OLIG2Q13516 323 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 SLC39A12Q504Y0 691 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 CXorf66Q5JRM2 361 aaPredicted RBP4.4□□□□□ -1.71
VPS50-214ENST00000477935 KCNT1Q5JUK3 1230 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 SFMBT2Q5VUG0 894 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 DUS1LQ6P1R4 473 aaKnown RBP4.4□□□□□ -1.71
VPS50-214ENST00000477935 GFRALQ6UXV0 394 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 GSTA5Q7RTV2 222 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 METTL23Q86XA0 190 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 TMEM219Q86XT9 240 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 NAXEQ8NCW5 288 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 CCDC148Q8NFR7 591 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 ETNPPLQ8TBG4 499 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 DUSP19Q8WTR2 217 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 SLC20A1Q8WUM9 679 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 SCFD1Q8WVM8 642 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 FEM1CQ96JP0 617 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 CEP295NLQ96MC4 621 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 XPO6Q96QU8 1125 aaKnown RBP4.4□□□□□ -1.71
VPS50-214ENST00000477935 SLC22A12Q96S37 553 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 CMKLR1Q99788 373 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 CSTL1Q9H114 145 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 POLR3FQ9H1D9 316 aaPredicted RBP4.4□□□□□ -1.71
VPS50-214ENST00000477935 PLEKHA5Q9HAU0 1116 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 ZDHHC4Q9NPG8 344 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 TCF7L2Q9NQB0 619 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 GDF3Q9NR23 364 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 TXLNGQ9NUQ3 528 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 TMEM30AQ9NV96 361 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 SEPT10Q9P0V9 454 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 ABI3Q9P2A4 366 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 WRAP73Q9P2S5 460 aaPredicted RBP4.4□□□□□ -1.71
VPS50-214ENST00000477935 AMDHD2Q9Y303 409 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 LOXL2Q9Y4K0 774 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 MYO18AQ92614 2054 aaKnown RBP4.4□□□□□ -1.71
VPS50-214ENST00000477935 ANKHD1Q8IWZ3 2542 aaKnown RBP4.4□□□□□ -1.71
VPS50-214ENST00000477935 CEP192Q8TEP8 1941 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 SVILO95425 2214 aa4.4□□□□□ -1.71
VPS50-214ENST00000477935 MED13Q9UHV7 2174 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 A0A1W2PPH5 198 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 K7ERI5 159 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 KRT86O43790 486 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 EDIL3O43854 480 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 XPNPEP2O43895 674 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 MAGEC1O60732 1142 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 PAGE4O60829 102 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 SEC14L2O76054 403 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 THEGLP0DJG4 465 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 MCF2P10911 925 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 IL7RP16871 459 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 ZNF182P17025 639 aaPredicted RBP4.39□□□□□ -1.71
VPS50-214ENST00000477935 FUT6P51993 359 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 RPL7AP62424 266 aaKnown RBP4.39□□□□□ -1.71
VPS50-214ENST00000477935 CSNK2A1P68400 391 aaPredicted RBP4.39□□□□□ -1.71
VPS50-214ENST00000477935 MYL7Q01449 175 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 KDSRQ06136 332 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 KRT81Q14533 505 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 ISXQ2M1V0 245 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 FUT11Q495W5 492 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 ZC2HC1CQ53FD0 456 aaPredicted RBP4.39□□□□□ -1.71
VPS50-214ENST00000477935 ZNF628Q5EBL2 1059 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 FOXL2NBQ6ZUU3 175 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 TIPARPQ7Z3E1 657 aaKnown RBP4.39□□□□□ -1.71
VPS50-214ENST00000477935 SMIM29Q86T20 159 aa4.39□□□□□ -1.71
VPS50-214ENST00000477935 C1orf87Q8N0U7 546 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms