RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 STAG3L4Q8TBR4 150 aa13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 ANKRD49Q8WVL7 239 aa13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 COL26A1Q96A83 441 aa13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 PYCR2Q96C36 320 aa13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 C8orf44Q96CB5 159 aa13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 RHBDF1Q96CC6 855 aa13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 TM4SF19Q96DZ7 209 aa13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 EGFL8Q99944 293 aa13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 CLK4Q9HAZ1 481 aaKnown RBP13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 MKKSQ9NPJ1 570 aaPredicted RBP13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 FBXL4Q9UKA2 621 aa13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 MAP4K5Q9Y4K4 846 aa13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 HS3ST3B1Q9Y662 390 aa13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 SLC22A7Q9Y694 548 aa13.12□□□□□ -0.31
SOX2-OT-208ENST00000477928 TNRC6AQ8NDV7 1962 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 NUP210LQ5VU65 1888 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 A0A087X1B8 175 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 NPEPPSL1A6NEC2 478 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 URADA6NGE7 173 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 AGPSO00116 658 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 FOXS1O43638 330 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 CDH1P12830 882 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 GNAZP19086 355 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 FBLP22087 321 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 HPDP32754 393 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 GMPRP36959 345 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 UQCRFS1P47985 274 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 SLC6A12P48065 614 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 SERPINB9P50453 376 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 MAT1AQ00266 395 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 MEF2AQ02078 507 aaPredicted RBP13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 TSNQ15631 228 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 VWA2Q5GFL6 755 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 TMEM214Q6NUQ4 689 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 VN1R4Q7Z5H5 301 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 ASPGQ86U10 573 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 THOC6Q86W42 341 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 RBMXL3Q8N7X1 1067 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 AMER3Q8N944 861 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 PDPRQ8NCN5 879 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 RHEBL1Q8TAI7 183 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 IFT81Q8WYA0 676 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 MIB2Q96AX9 1013 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 MIEF2Q96C03 454 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 OR4K3Q96R72 315 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 AIF1LQ9BQI0 150 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 UNKQ9C0B0 810 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 CDC42EP4Q9H3Q1 356 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 EHD1Q9H4M9 534 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 NINJ2Q9NZG7 142 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 C5AR2Q9P296 337 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 COPG2Q9UBF2 871 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 CSAG2Q9Y5P2 127 aa13.11□□□□□ -0.31
SOX2-OT-208ENST00000477928 A0A0A6YYC8 382 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 A0A1W2PQ72 361 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 FEZF1A0PJY2 475 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 SYCE1LA8MT33 242 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 I3L1I5 382 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 JRKO75564 520 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 SORBS2O94875 1100 aaKnown RBP13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 LTA4HP09960 611 aaKnown RBP13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 ZGLP1P0C6A0 271 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 SLC35E2BP0CK96 405 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 ECHS1P30084 290 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 KLC1Q07866 573 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 SRSF1Q07955 248 aaKnown RBP eCLIP13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 Q0VFX4 171 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 HERC3Q15034 1050 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 FAAH2Q6GMR7 532 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 METTL2BQ6P1Q9 378 aaKnown RBP13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 KIRREL2Q6UWL6 708 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 RAPH1Q70E73 1250 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 GPSM1Q86YR5 675 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 GALNT16Q8N428 558 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 CLEC1AQ8NC01 280 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 TRPV3Q8NET8 790 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 STT3BQ8TCJ2 826 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 SLC44A1Q8WWI5 657 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 SLC13A3Q8WWT9 602 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 NEIL2Q969S2 332 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 ISL2Q96A47 359 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 SPNS1Q9H2V7 528 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 ZNF552Q9H707 407 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 NT5DC2Q9H857 520 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 CAB39LQ9H9S4 337 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 GPR83Q9NYM4 423 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 ZFP69BQ9UJL9 534 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 ZNF180Q9UJW8 692 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 SLC22A14Q9Y267 594 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 ACOT9Q9Y305 439 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 ZNF451Q9Y4E5 1061 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 IKBKGQ9Y6K9 419 aa13.1□□□□□ -0.31
SOX2-OT-208ENST00000477928 A0A087WUV0 522 aaPredicted RBP13.09□□□□□ -0.31
SOX2-OT-208ENST00000477928 OR2W5A6NFC9 320 aa13.09□□□□□ -0.31
SOX2-OT-208ENST00000477928 PHGDHO43175 533 aaKnown RBP13.09□□□□□ -0.31
SOX2-OT-208ENST00000477928 LCMT2O60294 686 aaKnown RBP13.09□□□□□ -0.31
SOX2-OT-208ENST00000477928 KERAO60938 352 aa13.09□□□□□ -0.31
SOX2-OT-208ENST00000477928 H2AFYO75367 372 aaKnown RBP13.09□□□□□ -0.31
SOX2-OT-208ENST00000477928 S100BP04271 92 aaPredicted RBP13.09□□□□□ -0.31
SOX2-OT-208ENST00000477928 CELA2AP08217 269 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms