RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MROH7Q68CQ1 1323 aa3.71□□□□□ -1.81
UBR3-209ENST00000477461 PHLPP2Q6ZVD8 1323 aa3.71□□□□□ -1.81
UBR3-209ENST00000477461 A0A1W2PR77 199 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 DUXAA6NLW8 204 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 RSPH10B2B2RC85 870 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 K7ENM7 598 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 MITFO75030 526 aaPredicted RBP3.71□□□□□ -1.82
UBR3-209ENST00000477461 TSPAN9O75954 239 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 GCNT3O95395 438 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 C22orf31O95567 290 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 RSPH10BP0C881 870 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 ERVK-10P10266 1014 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 PPP1R2P41236 205 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 MSH2P43246 934 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 NAMPTP43490 491 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 PEX3P56589 373 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 IRX1P78414 480 aaPredicted RBP3.71□□□□□ -1.82
UBR3-209ENST00000477461 MC1RQ01726 317 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 NCBP1Q09161 790 aaKnown RBP3.71□□□□□ -1.82
UBR3-209ENST00000477461 CDC16Q13042 620 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 LPAL2Q16609 132 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 TPD52L1Q16890 204 aaPredicted RBP3.71□□□□□ -1.82
UBR3-209ENST00000477461 TECRLQ5HYJ1 363 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 ZNF658Q5TYW1 1059 aaPredicted RBP3.71□□□□□ -1.82
UBR3-209ENST00000477461 PCGF5Q86SE9 256 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 ZNF410Q86VK4 478 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 SYCP3Q8IZU3 236 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 NME8Q8N427 588 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 RASGEF1CQ8N431 466 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 RNF149Q8NC42 400 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 TRIM58Q8NG06 486 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 UTP15Q8TED0 518 aaKnown RBP3.71□□□□□ -1.82
UBR3-209ENST00000477461 LRRC15Q8TF66 581 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 DNAJB3Q8WWF6 145 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 PRPF31Q8WWY3 499 aaKnown RBP3.71□□□□□ -1.82
UBR3-209ENST00000477461 TMEM143Q96AN5 459 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 DNAJC19Q96DA6 116 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 ART5Q96L15 291 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 GFI1Q99684 422 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 BARD1Q99728 777 aaKnown RBP3.71□□□□□ -1.82
UBR3-209ENST00000477461 TSG101Q99816 390 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 GCOM2Q9BZD3 368 aaPredicted RBP3.71□□□□□ -1.82
UBR3-209ENST00000477461 NAT10Q9H0A0 1025 aaKnown RBP3.71□□□□□ -1.82
UBR3-209ENST00000477461 C2orf40Q9H1Z8 148 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 TSPY26PQ9H489 355 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 DHX33Q9H6R0 707 aaKnown RBP3.71□□□□□ -1.82
UBR3-209ENST00000477461 POLD4Q9HCU8 107 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 XPNPEP1Q9NQW7 623 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 ANO10Q9NW15 660 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 DNAJB4Q9UDY4 337 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 VPS28Q9UK41 221 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 MAN1B1Q9UKM7 699 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 EXOC7Q9UPT5 735 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 GINS2Q9Y248 185 aa3.71□□□□□ -1.82
UBR3-209ENST00000477461 UBE4BO95155 1302 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 UTRNP46939 3433 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 IGKV6-21A0A0C4DH24 114 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 BICDL2A1A5D9 508 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 MBLAC1A4D2B0 266 aaPredicted RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 OR5K3A6NET4 321 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 K7ERI5 159 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 PSMA7O14818 248 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 SLC16A4O15374 487 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 CALUO43852 315 aaPredicted RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 KLRC4O43908 158 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 TPPPO94811 219 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 ERLIN2O94905 339 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 FGFR1OPO95684 399 aaKnown RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 VTNP04004 478 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 CLTBP09497 229 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 CSH1P0DML2 217 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 CSH2P0DML3 217 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 GNB3P16520 340 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 ZNF10P21506 573 aaPredicted RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 GLRA2P23416 452 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 HRH2P25021 359 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 NMT1P30419 496 aaKnown RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 ARL2P36404 184 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 MATR3P43243 847 aaKnown RBP eCLIP3.7□□□□□ -1.82
UBR3-209ENST00000477461 CLK1P49759 484 aaKnown RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 GPC3P51654 580 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 ZNF131P52739 623 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 NLRP11P59045 1033 aaKnown RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 TPM4P67936 248 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 MRPS6P82932 125 aaKnown RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 LAMTOR4Q0VGL1 99 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 MAPK6Q16659 721 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 MARCH8Q5T0T0 291 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 KLHL10Q6JEL2 608 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 RBM43Q6ZSC3 357 aaKnown RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 ZNF534Q76KX8 674 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 CATSPER4Q7RTX7 472 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 PIWIL4Q7Z3Z4 852 aaKnown RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 SZRD1Q7Z422 152 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 HAUS6Q7Z4H7 955 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 GALNT5Q7Z7M9 940 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 CCDC190Q86UF4 302 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 SERINC5Q86VE9 423 aa3.7□□□□□ -1.82
UBR3-209ENST00000477461 APLFQ8IW19 511 aaPredicted RBP3.7□□□□□ -1.82
UBR3-209ENST00000477461 MYOCDQ8IZQ8 938 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms