RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SCTRP47872 440 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 AVPR1BP47901 424 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 HNMTP50135 292 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 REEP5Q00765 189 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 DLG1Q12959 904 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 AIMP2Q13155 320 aaKnown RBP20.06■□□□□ 0.8
LIME1-204ENST00000476183 NAB1Q13506 487 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 CSHL1Q14406 222 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 VWA5B1Q5TIE3 1220 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 ATG9BQ674R7 924 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 PDSS2Q86YH6 399 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 CTAGE4Q8IX94 777 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 KLHDC8AQ8IYD2 350 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 RBMXL3Q8N7X1 1067 aaKnown RBP20.06■□□□□ 0.8
LIME1-204ENST00000476183 MNS1Q8NEH6 495 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 PELI2Q9HAT8 420 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 C14orf105Q9NVL8 296 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 G3BP2Q9UN86 482 aaKnown RBP20.06■□□□□ 0.8
LIME1-204ENST00000476183 H0YIG0 161 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 SGK494L7N484 410 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 KIF2AO00139 706 aaPredicted RBP20.05■□□□□ 0.8
LIME1-204ENST00000476183 TAPBPO15533 448 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 JRKO75564 520 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 SLC35E2BP0CK96 405 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 ECHS1P30084 290 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 KCNC1P48547 511 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 EMP2P54851 167 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 ATP6V0D1P61421 351 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 SLMAPQ14BN4 828 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 IGFBP7Q16270 282 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 TUBB8Q3ZCM7 444 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 FBXO48Q5FWF7 155 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 NXPE4Q6UWF7 544 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 TMPRSS11BQ86T26 416 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 MRRFQ96E11 262 aaKnown RBP20.05■□□□□ 0.8
LIME1-204ENST00000476183 TMEM79Q9BSE2 394 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 MFRPQ9BY79 579 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 FAM129AQ9BZQ8 928 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 KCNE2Q9Y6J6 123 aa20.05■□□□□ 0.8
LIME1-204ENST00000476183 RP1L1Q8IWN7 2480 aaPredicted RBP20.04■□□□□ 0.8
LIME1-204ENST00000476183 HMX2A2RU54 273 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 NDUFS4O43181 175 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 WDR47O94967 919 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 BMP10O95393 424 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 SLC35G6P0C7Q6 338 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 ACPPP15309 386 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 ITGA3P26006 1051 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 VARSP26640 1264 aaKnown RBP20.04■□□□□ 0.8
LIME1-204ENST00000476183 CD97P48960 835 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 CSRP3P50461 194 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 MLLT10P55197 1068 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 Q0VFX4 171 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 FAAH2Q6GMR7 532 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 GPSM1Q86YR5 675 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 RELL1Q8IUW5 271 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 PARP9Q8IXQ6 854 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 AFAP1L2Q8N4X5 818 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 ANKRD53Q8N9V6 530 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 IFT81Q8WYA0 676 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 KIAA1191Q96A73 305 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 ZBTB20Q9HC78 741 aaPredicted RBP20.04■□□□□ 0.8
LIME1-204ENST00000476183 HCN3Q9P1Z3 774 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 C5AR2Q9P296 337 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 SLC22A7Q9Y694 548 aa20.04■□□□□ 0.8
LIME1-204ENST00000476183 MAP2K7O14733 419 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 DPM1O60762 260 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 RDH16O75452 317 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 KLHL18O94889 574 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 SERPIND1P05546 499 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 HEXBP07686 556 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 COX6A1P12074 109 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 FOXK1P85037 733 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 PWP1Q13610 501 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 BMPR2Q13873 1038 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 GLE1Q53GS7 698 aaKnown RBP20.03■□□□□ 0.8
LIME1-204ENST00000476183 RAPH1Q70E73 1250 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 OR51Q1Q8NH59 317 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 KIF18AQ8NI77 898 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 NT5CQ8TCD5 201 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 ESAMQ96AP7 390 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 AIF1LQ9BQI0 150 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 ANKHQ9HCJ1 492 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 IGSF5Q9NSI5 407 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 MTRF1LQ9UGC7 380 aaKnown RBP20.03■□□□□ 0.8
LIME1-204ENST00000476183 ZFP69BQ9UJL9 534 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 NAALAD2Q9Y3Q0 740 aa20.03■□□□□ 0.8
LIME1-204ENST00000476183 FLNBO75369 2602 aaKnown RBP20.02■□□□□ 0.8
LIME1-204ENST00000476183 ZNF860A6NHJ4 632 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 SORBS2O94875 1100 aaKnown RBP20.02■□□□□ 0.8
LIME1-204ENST00000476183 B3GALT4O96024 378 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 HPP00738 406 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 CRABP2P29373 138 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 AHRP35869 848 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 GGT5P36269 586 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 KCNC4Q03721 635 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 EEF1A2Q05639 463 aaKnown RBP20.02■□□□□ 0.8
LIME1-204ENST00000476183 MROH9Q5TGP6 573 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 JMJD6Q6NYC1 403 aaPredicted RBP20.02■□□□□ 0.8
LIME1-204ENST00000476183 SLCO4C1Q6ZQN7 724 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 ISCA2Q86U28 154 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms