RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 PRF1P14222 555 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 GNSP15586 552 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 FBLP22087 321 aaKnown RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 ELAVL4P26378 380 aaKnown RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 PPP2R1AP30153 589 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 RPL21P46778 160 aaKnown RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 PDX1P52945 283 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 SEC61BP60468 96 aaKnown RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 UBE2HP62256 183 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 FKBP1BP68106 108 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 MAT1AQ00266 395 aaKnown RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 PDE1BQ01064 536 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 ZNF415Q09FC8 603 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 RASGEF1BQ0VAM2 473 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 DMP1Q13316 513 aaPredicted RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 BTG3Q14201 252 aaPredicted RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 HNF4GQ14541 408 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 MXD4Q14582 209 aaPredicted RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 CA9Q16790 459 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 PRTGQ2VWP7 1150 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 ODF3L2Q3SX64 289 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 HSP90AB3PQ58FF7 597 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 FSCBQ5H9T9 825 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 LCE3BQ5TA77 95 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 GRTP1Q5TC63 336 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 PXDC1Q5TGL8 231 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 ZNF626Q68DY1 528 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 ARHGAP17Q68EM7 881 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 SLC16A9Q7RTY1 509 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 LONP2Q86WA8 852 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 ZDHHC21Q8IVQ6 265 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 MMD2Q8IY49 270 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 LGI2Q8N0V4 545 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 CERS5Q8N5B7 392 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 BMPERQ8N8U9 685 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 FAM133AQ8N9E0 248 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 FADS6Q8N9I5 356 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 NOA1Q8NC60 698 aaKnown RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 FAM71CQ8NEG0 241 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 OR5R1Q8NH85 324 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 THAP6Q8TBB0 222 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 WASF1Q92558 559 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 ZG16BQ96DA0 208 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 TXNDC15Q96J42 360 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 MARK4Q96L34 752 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 TBCDQ9BTW9 1192 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 TRAF4Q9BUZ4 470 aaPredicted RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 NTMT1Q9BV86 223 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 FTHL17Q9BXU8 183 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 RIMS4Q9H426 269 aaPredicted RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 RNF121Q9H920 327 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 PLAC1Q9HBJ0 212 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 NOX4Q9NPH5 578 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 MRPL17Q9NRX2 175 aaKnown RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 DDX18Q9NVP1 670 aaKnown RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 NARFQ9UHQ1 456 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 NSG2Q9Y328 171 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 YIPF1Q9Y548 306 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 THOC2Q8NI27 1593 aaKnown RBP3.92□□□□□ -1.78
VPS13D-207ENST00000476169 LAMC3Q9Y6N6 1575 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 PFASO15067 1338 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 PTPRCP08575 1304 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 RAD54L2Q9Y4B4 1467 aa3.92□□□□□ -1.78
VPS13D-207ENST00000476169 WDR62O43379 1518 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 TMEM89A2RUT3 159 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 CCDC162PA2VCL2 907 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 OR5K3A6NET4 321 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 CASTOR2A6NHX0 329 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 LRRIQ4A6NIV6 560 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 ANKRD30BLA7E2S9 258 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 A8MUI8 341 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 BECN2A8MW95 431 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 LGALS8O00214 317 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 CHUKO15111 745 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 SCO2O43819 266 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 ACSL4O60488 711 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 LDB3O75112 727 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 CIB2O75838 187 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 KIAA0754O94854 1291 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 MFN2O95140 757 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 STBD1O95210 358 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 CA3P07451 260 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 HMBSP08397 361 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 RRASP10301 218 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 ACP2P11117 423 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 HSPA8P11142 646 aaKnown RBP3.91□□□□□ -1.78
VPS13D-207ENST00000476169 CETPP11597 493 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 B4GALT1P15291 398 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 GOT1P17174 413 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 TNFRSF1BP20333 461 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 DRD5P21918 477 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 STIP1P31948 543 aaKnown RBP3.91□□□□□ -1.78
VPS13D-207ENST00000476169 RFX5P48382 616 aaPredicted RBP3.91□□□□□ -1.78
VPS13D-207ENST00000476169 VCPP55072 806 aaKnown RBP3.91□□□□□ -1.78
VPS13D-207ENST00000476169 MYBPC1Q00872 1141 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 PDIA5Q14554 519 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 PHKG1Q16816 387 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 CCDC57Q2TAC2 916 aa3.91□□□□□ -1.78
VPS13D-207ENST00000476169 KIF19Q2TAC6 998 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms