RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 TIGD3Q6B0B8 471 aa17.13■□□□□ 0.33
CCM2-207ENST00000475551 SCN4BQ8IWT1 228 aa17.13■□□□□ 0.33
CCM2-207ENST00000475551 SLC5A8Q8N695 610 aa17.13■□□□□ 0.33
CCM2-207ENST00000475551 LPCAT1Q8NF37 534 aa17.13■□□□□ 0.33
CCM2-207ENST00000475551 ANKK1Q8NFD2 765 aa17.13■□□□□ 0.33
CCM2-207ENST00000475551 OR10G2Q8NGC3 310 aa17.13■□□□□ 0.33
CCM2-207ENST00000475551 C8orf48Q96LL4 319 aa17.13■□□□□ 0.33
CCM2-207ENST00000475551 FRMD6Q96NE9 622 aa17.13■□□□□ 0.33
CCM2-207ENST00000475551 PANX1Q96RD7 426 aa17.13■□□□□ 0.33
CCM2-207ENST00000475551 BBS2Q9BXC9 721 aa17.13■□□□□ 0.33
CCM2-207ENST00000475551 TMEM184CQ9NVA4 438 aa17.13■□□□□ 0.33
CCM2-207ENST00000475551 FNDC3AQ9Y2H6 1198 aaKnown RBP17.13■□□□□ 0.33
CCM2-207ENST00000475551 ZNF451Q9Y4E5 1061 aa17.13■□□□□ 0.33
CCM2-207ENST00000475551 B4DXG7 233 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 ADAMDEC1O15204 470 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 CLDN9O95484 217 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 CR2P20023 1033 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 PTX3P26022 381 aaPredicted RBP17.12■□□□□ 0.33
CCM2-207ENST00000475551 HOXD9P28356 352 aaPredicted RBP17.12■□□□□ 0.33
CCM2-207ENST00000475551 TRIM71Q2Q1W2 868 aaKnown RBP17.12■□□□□ 0.33
CCM2-207ENST00000475551 XKRXQ6PP77 449 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 CD300LGQ6UXG3 332 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 CD99L2Q8TCZ2 262 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 COQ8BQ96D53 544 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 DPH2Q9BQC3 489 aaPredicted RBP17.12■□□□□ 0.33
CCM2-207ENST00000475551 CNPPD1Q9BV87 410 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 CINPQ9BW66 212 aaPredicted RBP17.12■□□□□ 0.33
CCM2-207ENST00000475551 TTLL2Q9BWV7 592 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 IMPAD1Q9NX62 359 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 DNMT3LQ9UJW3 386 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 DUSP12Q9UNI6 340 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 SH3D21A4FU49 640 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 MAGEB17A8MXT2 336 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 SUV39H1O43463 412 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 CTPS1P17812 591 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 IL12RB1P42701 662 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 CD83Q01151 205 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 EFR3AQ14156 821 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 BPHLQ86WA6 291 aaPredicted RBP17.12■□□□□ 0.33
CCM2-207ENST00000475551 LAX1Q8IWV1 398 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 OR5H6Q8NGV6 325 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 CMTM7Q96FZ5 175 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 CITED4Q96RK1 184 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 SPATA9Q9BWV2 254 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 APOL5Q9BWW9 433 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 TMEM245Q9H330 911 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 RNF121Q9H920 327 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 TIGARQ9NQ88 270 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 TLR8Q9NR97 1041 aaKnown RBP17.12■□□□□ 0.33
CCM2-207ENST00000475551 SAGE1Q9NXZ1 904 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 KLHL21Q9UJP4 597 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 GABRQQ9UN88 632 aa17.12■□□□□ 0.33
CCM2-207ENST00000475551 A8MVJ9 347 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 CPNE3O75131 537 aaKnown RBP17.11■□□□□ 0.33
CCM2-207ENST00000475551 LRATO95237 230 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 ADRA2AP08913 450 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 AZGP1P25311 298 aaKnown RBP17.11■□□□□ 0.33
CCM2-207ENST00000475551 CRYBA2P53672 197 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 NKX3-2P78367 333 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 CACNG1Q06432 222 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 TNK1Q13470 666 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 DMC1Q14565 340 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 ARHGEF6Q15052 776 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 TAB1Q15750 504 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 GLYR1Q49A26 553 aaPredicted RBP17.11■□□□□ 0.33
CCM2-207ENST00000475551 C5orf22Q49AR2 442 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 SLC35F1Q5T1Q4 408 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 PTRHD1Q6GMV3 140 aaKnown RBP17.11■□□□□ 0.33
CCM2-207ENST00000475551 TSEN54Q7Z6J9 526 aaKnown RBP17.11■□□□□ 0.33
CCM2-207ENST00000475551 SLC38A6Q8IZM9 456 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 TTC16Q8NEE8 873 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 UTP15Q8TED0 518 aaKnown RBP17.11■□□□□ 0.33
CCM2-207ENST00000475551 SELENOMQ8WWX9 145 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 SNAPC3Q92966 411 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 OPALINQ96PE5 141 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 CIPCQ9C0C6 399 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 CMAHPQ9Y471 501 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 A0A0D9SEW6 157 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 IQCMA0A1B0GVH7 501 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 OR6C70A6NIJ9 312 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 ANKRD66B4E2M5 251 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 SCAMP3O14828 347 aaKnown RBP17.11■□□□□ 0.33
CCM2-207ENST00000475551 ARHGEF9O43307 516 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 SCG5P05408 212 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 ACPPP15309 386 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 DGKAP23743 735 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 KCNQ1P51787 676 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 CCL14Q16627 93 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 CPSF6Q16630 551 aaKnown RBP eCLIP17.11■□□□□ 0.33
CCM2-207ENST00000475551 HKDC1Q2TB90 917 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 ZNF621Q6ZSS3 439 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 CCDC149Q6ZUS6 474 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 OR4C15Q8NGM1 316 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 ZNF296Q8WUU4 475 aaPredicted RBP17.11■□□□□ 0.33
CCM2-207ENST00000475551 REPS1Q96D71 796 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 MYEOVQ96EZ4 313 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 DOHHQ9BU89 302 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 ABHD16BQ9H3Z7 469 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 NIPAL2Q9H841 368 aa17.11■□□□□ 0.33
CCM2-207ENST00000475551 ATP13A2Q9NQ11 1180 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms