RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CDC25CP30307 473 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 MTCP1P56278 107 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 CCDC92Q53HC0 331 aaPredicted RBP5.25□□□□□ -1.57
SMC5-203ENST00000475540 RPUSD3Q6P087 351 aaKnown RBP5.25□□□□□ -1.57
SMC5-203ENST00000475540 GDPGP1Q6ZNW5 385 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 GET4Q7L5D6 327 aaPredicted RBP5.25□□□□□ -1.57
SMC5-203ENST00000475540 Q8N377 158 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 CHCHD4Q8N4Q1 142 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 LRTM2Q8N967 370 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 CCDC63Q8NA47 563 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 OR4C15Q8NGM1 316 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 AFAP1L1Q8TED9 768 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 CHURC1Q8WUH1 139 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 SEPT1Q8WYJ6 367 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 RMDN2Q96LZ7 410 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 ADPGKQ9BRR6 497 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 FZD8Q9H461 694 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 ZWILCHQ9H900 591 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 RAVER2Q9HCJ3 691 aaKnown RBP5.25□□□□□ -1.57
SMC5-203ENST00000475540 C5AR2Q9P296 337 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 NPHP3Q7Z494 1330 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 TP53BP1Q12888 1972 aaPredicted RBP5.24□□□□□ -1.57
SMC5-203ENST00000475540 A0A1W2PPW3 197 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 CYTIPO60759 359 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 IGHV3-13P01766 116 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 STAG3L1P0CL83 205 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 F3P13726 295 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 CAPN2P17655 700 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 EPORP19235 508 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 CAPGP40121 348 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 PGFP49763 221 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 CAMK2DQ13557 499 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 ZNF239Q16600 458 aaKnown RBP5.24□□□□□ -1.57
SMC5-203ENST00000475540 SNX32Q86XE0 403 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 ERC1Q8IUD2 1116 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 CCDC60Q8IWA6 550 aaPredicted RBP5.24□□□□□ -1.57
SMC5-203ENST00000475540 CNPY4Q8N129 248 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 VPS33AQ96AX1 596 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 PYCR2Q96C36 320 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 SPATA33Q96N06 139 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 NAA11Q9BSU3 229 aaPredicted RBP5.24□□□□□ -1.57
SMC5-203ENST00000475540 RAB11FIP5Q9BXF6 653 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 SLC7A10Q9NS82 523 aa5.24□□□□□ -1.57
SMC5-203ENST00000475540 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.23□□□□□ -1.57
SMC5-203ENST00000475540 A8MXK9 166 aa5.23□□□□□ -1.57
SMC5-203ENST00000475540 C17orf105B2RV13 164 aa5.23□□□□□ -1.57
SMC5-203ENST00000475540 TBCAO75347 108 aaKnown RBP5.23□□□□□ -1.57
SMC5-203ENST00000475540 HSPA4LO95757 839 aa5.23□□□□□ -1.57
SMC5-203ENST00000475540 HPRP00739 348 aa5.23□□□□□ -1.57
SMC5-203ENST00000475540 PTGER3P43115 390 aa5.23□□□□□ -1.57
SMC5-203ENST00000475540 SULT2A1Q06520 285 aa5.23□□□□□ -1.57
SMC5-203ENST00000475540 MZT1Q08AG7 82 aa5.23□□□□□ -1.57
SMC5-203ENST00000475540 ZNF177Q13360 481 aaPredicted RBP5.23□□□□□ -1.57
SMC5-203ENST00000475540 OR4C11Q6IEV9 310 aa5.23□□□□□ -1.57
SMC5-203ENST00000475540 CPEB2Q7Z5Q1 589 aaKnown RBP5.23□□□□□ -1.57
SMC5-203ENST00000475540 ADCK2Q7Z695 626 aa5.23□□□□□ -1.57
SMC5-203ENST00000475540 SPAG16Q8N0X2 631 aa5.23□□□□□ -1.57
SMC5-203ENST00000475540 KATNB1Q9BVA0 655 aa5.23□□□□□ -1.57
SMC5-203ENST00000475540 ANKRD2Q9GZV1 360 aa5.23□□□□□ -1.57
SMC5-203ENST00000475540 A0A1W2PPR1 153 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 RGS7P49802 495 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 DUSP5Q16690 384 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 KRBOX4Q5JUW0 171 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 PRSS55Q6UWB4 352 aaPredicted RBP5.22□□□□□ -1.57
SMC5-203ENST00000475540 PPP1R21Q6ZMI0 780 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 C11orf57Q6ZUT1 292 aaPredicted RBP5.22□□□□□ -1.57
SMC5-203ENST00000475540 ERN2Q76MJ5 926 aaKnown RBP5.22□□□□□ -1.57
SMC5-203ENST00000475540 CCDC186Q7Z3E2 898 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 GALNTL5Q7Z4T8 443 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 NRARPQ7Z6K4 114 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 CDC20BQ86Y33 519 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 OR10G7Q8NGN6 311 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 SLC26A7Q8TE54 656 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 FOXN4Q96NZ1 517 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 PI4K2AQ9BTU6 479 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 OR10A4Q9H209 315 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 CCDC177Q9NQR7 707 aaPredicted RBP5.22□□□□□ -1.57
SMC5-203ENST00000475540 BAIAP2L1Q9UHR4 511 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 LIPGQ9Y5X9 500 aa5.22□□□□□ -1.57
SMC5-203ENST00000475540 MTMR11A4FU01 709 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 K7EQD1 137 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 RECQL5O94762 991 aaPredicted RBP5.21□□□□□ -1.58
SMC5-203ENST00000475540 POP4O95707 220 aaKnown RBP5.21□□□□□ -1.58
SMC5-203ENST00000475540 BAG2O95816 211 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 MYOGP15173 224 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 OXTRP30559 389 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 CSRP3P50461 194 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 COX10Q12887 443 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 RIGQ13278 110 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 SCARB2Q14108 478 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 HYAL4Q2M3T9 481 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 MS4A18Q3C1V0 323 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 FAM174BQ3ZCQ3 159 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 ATP1A1-AS1Q5TC04 95 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 TTC27Q6P3X3 843 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 FUT10Q6P4F1 479 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 C3P1Q6ZMU1 363 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 NPRL2Q8WTW4 380 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 GDAP1L1Q96MZ0 367 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 MRPL9Q9BYD2 267 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms