RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PTK6Q13882 451 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 EXT1Q16394 746 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 KCTD19Q17RG1 926 aaPredicted RBP13.19□□□□□ -0.3
CCDC78-209ENST00000474647 TTLL9Q3SXZ7 439 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 SFT2D3Q587I9 215 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 H3F3CQ6NXT2 135 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 PAPD4Q6PIY7 484 aaKnown RBP13.19□□□□□ -0.3
CCDC78-209ENST00000474647 Q6ZPB1 254 aaPredicted RBP13.19□□□□□ -0.3
CCDC78-209ENST00000474647 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.19□□□□□ -0.3
CCDC78-209ENST00000474647 SPNS2Q8IVW8 549 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 AGAP11Q8TF27 550 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 SCMH1Q96GD3 660 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 TCF12Q99081 682 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 SLC30A3Q99726 388 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 NPAS2Q99743 824 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 KIFC1Q9BW19 673 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 ANKHQ9HCJ1 492 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 SOX13Q9UN79 622 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 DRG1Q9Y295 367 aaKnown RBP13.19□□□□□ -0.3
CCDC78-209ENST00000474647 ZNF835Q9Y2P0 537 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 ITPR3Q14573 2671 aa13.19□□□□□ -0.3
CCDC78-209ENST00000474647 CTAGE9A4FU28 777 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 ZNF860A6NHJ4 632 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 CYC1P08574 325 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 PAMP19021 973 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 CLCN7P51798 805 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 ADARP55265 1226 aaKnown RBP13.18□□□□□ -0.3
CCDC78-209ENST00000474647 TAS2R50P59544 299 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 TBPL1P62380 186 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 RELAQ04206 551 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 ABRAXAS2Q15018 415 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 MAPKAPK3Q16644 382 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 ZNF470Q6ECI4 717 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 CASC4Q6P4E1 433 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 CENPUQ71F23 418 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 VN1R4Q7Z5H5 301 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 CILP2Q8IUL8 1156 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 GHDCQ8N2G8 530 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 SLC5A8Q8N695 610 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 HORMAD2Q8N7B1 307 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 PRELID2Q8N945 189 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 GIMAP7Q8NHV1 300 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 M1APQ8TC57 530 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 CA5BP1Q8WTZ4 195 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 PEX11GQ96HA9 241 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 LPAR4Q99677 370 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 CCDC68Q9H2F9 335 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 MMP25Q9NPA2 562 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 CCDC177Q9NQR7 707 aaPredicted RBP13.18□□□□□ -0.3
CCDC78-209ENST00000474647 LRFN1Q9P244 771 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 ARHGAP21Q5T5U3 1957 aa13.18□□□□□ -0.3
CCDC78-209ENST00000474647 FEZF1A0PJY2 475 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 ASPDHA6ND91 283 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 ASNA1O43681 348 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 ZBTB14O43829 449 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 KIF5CO60282 957 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 TSPAN12O95859 305 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 ZNF24P17028 368 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 IMPA1P29218 277 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 BCL6P41182 706 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 NSDHLQ15738 373 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 KIAA0930Q6ICG6 404 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-209ENST00000474647 TMEM214Q6NUQ4 689 aaKnown RBP13.17□□□□□ -0.3
CCDC78-209ENST00000474647 MEX3BQ6ZN04 569 aaKnown RBP13.17□□□□□ -0.3
CCDC78-209ENST00000474647 UBE2R2Q712K3 238 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-209ENST00000474647 LRRC56Q8IYG6 542 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-209ENST00000474647 RNF10Q8N5U6 811 aaKnown RBP13.17□□□□□ -0.3
CCDC78-209ENST00000474647 KCT2Q8NC54 265 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 FBXO15Q8NCQ5 510 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-209ENST00000474647 TSLPQ969D9 159 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 ALKBH8Q96BT7 664 aaKnown RBP13.17□□□□□ -0.3
CCDC78-209ENST00000474647 SDCCAG3Q96C92 435 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 C14orf79Q96F83 325 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 CDCP1Q9H5V8 836 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 LZTFL1Q9NQ48 299 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 FBXO6Q9NRD1 293 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-209ENST00000474647 TMEM184CQ9NVA4 438 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 INTS10Q9NVR2 710 aaKnown RBP13.17□□□□□ -0.3
CCDC78-209ENST00000474647 PPT2Q9UMR5 302 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 SH2B3Q9UQQ2 575 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 VPS9D1Q9Y2B5 631 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 ZKSCAN5Q9Y2L8 839 aa13.17□□□□□ -0.3
CCDC78-209ENST00000474647 MAP1AP78559 2803 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-209ENST00000474647 TCRBV7S3A2A0A539 114 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 USP27XA6NNY8 438 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 PRRG2O14669 202 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 NDC80O14777 642 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 AVILO75366 819 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 SLC25A12O75746 678 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 SP1P08047 785 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 MPC1LP0DKB6 136 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 TPSB2P20231 275 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 CAPN3P20807 821 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 COILP38432 576 aaPredicted RBP13.16□□□□□ -0.3
CCDC78-209ENST00000474647 OR4D2P58180 307 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 USP10Q14694 798 aaKnown RBP13.16□□□□□ -0.3
CCDC78-209ENST00000474647 TPSAB1Q15661 275 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 SLC25A25Q6KCM7 469 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 NEPROQ6NW34 567 aa13.16□□□□□ -0.3
CCDC78-209ENST00000474647 C4orf22Q6V702 233 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms