RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CHRNA4P43681 627 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 OR2B6P58173 313 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 HERV-K104P63124 156 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 TXNL4AP83876 142 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 BNC1Q01954 994 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 BDH1Q02338 343 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PUDPQ08623 228 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 DLG1Q12959 904 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PDCLQ13371 301 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 OXA1LQ15070 435 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 EXOC3L4Q17RC7 722 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 LDLRAP1Q5SW96 308 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 E4F1Q66K89 784 aaPredicted RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 SCIMPQ6UWF3 145 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 CLEC18BQ6UXF7 455 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PRR23BQ6ZRT6 265 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 LGI2Q8N0V4 545 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 TERB1Q8NA31 727 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ANKLE1Q8NAG6 615 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 COLGALT1Q8NBJ5 622 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 CLEC18CQ8NCF0 446 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 GPBAR1Q8TDU6 330 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 FIG4Q92562 907 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 FAM46BQ96A09 425 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SLC41A3Q96GZ6 507 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 KLHL15Q96M94 604 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ASCL2Q99929 193 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 HOPXQ9BPY8 73 aaPredicted RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 MRI1Q9BV20 369 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ENKD1Q9H0I2 346 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 MKKSQ9NPJ1 570 aaPredicted RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 BABAM2Q9NXR7 383 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 GTSE1Q9NYZ3 720 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 TREM2Q9NZC2 230 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 GLTPQ9NZD2 209 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 RBPJLQ9UBG7 517 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 GNPTGQ9UJJ9 305 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 DNAJC12Q9UKB3 198 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PSMD13Q9UNM6 376 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ICKQ9UPZ9 632 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 KCNK6Q9Y257 313 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 LIPGQ9Y5X9 500 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 USP3Q9Y6I4 520 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 FAM86C2PA6NEL3 165 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 CCDC160A6NGH7 325 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 GLOD5A6NK44 160 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 HEPACAM2A8MVW5 462 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 BTBD18B2RXH4 712 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ST8SIA3O43173 380 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 TNFSF14O43557 240 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 HUS1O60921 280 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 EIF3GO75821 320 aaKnown RBP eCLIP3.36□□□□□ -1.87
UBR3-208ENST00000474426 SNRPB2P08579 225 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 CFHP08603 1231 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 RPA2P15927 270 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ZNF18P17022 549 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 GZMHP20718 246 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 CALML3P27482 149 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 VIPR1P32241 457 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 UGT2B10P36537 528 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ZNF143P52747 638 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 RAB11AP62491 216 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 SUMO1P63165 101 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 FOLH1Q04609 750 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 TUBB3Q13509 450 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 RAB11BQ15907 218 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 NTRK3Q16288 839 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 SLC35D3Q5M8T2 416 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 TMEM71Q6P5X7 295 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ZNF790Q6PG37 636 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 BRAT1Q6PJG6 821 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 LRFN4Q6PJG9 635 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 VSTM1Q6UX27 236 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 LIPIQ6XZB0 460 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 RBPMS2Q6ZRY4 209 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 GAREM2Q75VX8 874 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 P4HA3Q7Z4N8 544 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ZFP82Q8N141 532 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 FSTL5Q8N475 847 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 CDYL2Q8N8U2 506 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ADPRHL1Q8NDY3 354 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ABHD11Q8NFV4 315 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 HGDQ93099 445 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 UTP4Q969X6 686 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 S100PBPQ96BU1 408 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 TCEAL4Q96EI5 215 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 MISP3Q96FF7 219 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 CLPTM1LQ96KA5 538 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ZNF512Q96ME7 567 aaPredicted RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 SERPINB11Q96P15 392 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 PFDN5Q99471 154 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 POP1Q99575 1024 aaKnown RBP3.36□□□□□ -1.87
UBR3-208ENST00000474426 FEM1AQ9BSK4 669 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 PCBD2Q9H0N5 130 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 AUNIPQ9H7T9 357 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 GPAMQ9HCL2 828 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 NIT2Q9NQR4 276 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 ENTPD7Q9NQZ7 604 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 LATS2Q9NRM7 1088 aa3.36□□□□□ -1.87
UBR3-208ENST00000474426 WSB2Q9NYS7 404 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms