RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	FOLH1	Q04609	750 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ITGA9	Q13797	1035 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	LCN1P1	Q5VSP4	162 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	FAM46C	Q5VWP2	391 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	OR4C11	Q6IEV9	310 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	PSRC1	Q6PGN9	363 aa	Predicted RBP	3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	SLC25A47	Q6Q0C1	308 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	PIGW	Q7Z7B1	504 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	HOOK3	Q86VS8	718 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	P2RY8	Q86VZ1	359 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	LACC1	Q8IV20	430 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	DCLK2	Q8N568	766 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	CCDC63	Q8NA47	563 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	OR5AP2	Q8NGF4	316 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	NCOA7	Q8NI08	942 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	GDAP1	Q8TB36	358 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	APOBEC4	Q8WW27	367 aa	Known RBP	3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ATP6V1E2	Q96A05	226 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	PGM2	Q96G03	612 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	RBM41	Q96IZ5	413 aa	Known RBP	3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	PARK7	Q99497	189 aa	Known RBP	3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	SDCBP2	Q9H190	292 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	RIMS4	Q9H426	269 aa	Predicted RBP	3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	COPS7B	Q9H9Q2	264 aa	Predicted RBP	3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	TUFT1	Q9NNX1	390 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	SLC7A10	Q9NS82	523 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	PKD2L2	Q9NZM6	624 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	OR6C2	Q9NZP2	312 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	SEPT10	Q9P0V9	454 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	C19orf25	Q9UFG5	118 aa	Predicted RBP	3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ARMCX3	Q9UH62	379 aa	Predicted RBP	3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	HBS1L	Q9Y450	684 aa	Known RBP	3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	KLK4	Q9Y5K2	254 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	IGSF1	Q8N6C5	1336 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	TONSL	Q96HA7	1378 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	HFM1	A2PYH4	1435 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272	EFCAB5	A4FU69	1503 aa		3.08	□□□□□ -1.92
TMEM50B-208	ENST00000474272		A0A087WUV0	522 aa	Predicted RBP	3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272		A0A087WW49	117 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	FAM170A	A1A519	330 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	MTMR11	A4FU01	709 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	OOEP	A6NGQ2	149 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ZNF195	O14628	629 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	EPHB6	O15197	1021 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	STX6	O43752	255 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	KRT33A	O76009	404 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	HMBS	P08397	361 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	KRTAP10-8	P60410	259 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	MYL7	Q01449	175 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	YWHAH	Q04917	246 aa	Predicted RBP	3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	SULT2A1	Q06520	285 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	IL10RB	Q08334	325 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ENPP2	Q13822	863 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	OPCML	Q14982	345 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	SLMAP	Q14BN4	828 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	TEAD2	Q15562	447 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ZNF74	Q16587	644 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	KRTAP13-3	Q3SY46	172 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ANKRD20A4	Q4UJ75	823 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ANKRD20A8P	Q5CZ79	823 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ANKRD20A2	Q5SQ80	823 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ADAMTSL4-AS1	Q5T5F5	129 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ANKRD20A1	Q5TYW2	823 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ANKRD20A3	Q5VUR7	823 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ZNF770	Q6IQ21	691 aa	Predicted RBP	3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	TTC27	Q6P3X3	843 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	C11orf88	Q6PI97	169 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	LEKR1	Q6ZMV7	388 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	GBP6	Q6ZN66	633 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272		Q6ZSR9	355 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	CPEB2	Q7Z5Q1	589 aa	Known RBP	3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	CCDC60	Q8IWA6	550 aa	Predicted RBP	3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	RCOR2	Q8IZ40	523 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	DDHD1	Q8NEL9	900 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	OR7A2P	Q8NGA2	310 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	GATAD1	Q8WUU5	269 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	AZIN2	Q96A70	460 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	C18orf12	Q96KH6	178 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	AK8	Q96MA6	479 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	LPAR4	Q99677	370 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	C2orf40	Q9H1Z8	148 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	PPAN	Q9NQ55	473 aa	Known RBP	3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	MAN2C1	Q9NTJ4	1040 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ZDHHC18	Q9NUE0	388 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	RNF186	Q9NXI6	227 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	NOCT	Q9UK39	431 aa	Known RBP	3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	MIA2	Q96PC5	1412 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	CCDC18	Q5T9S5	1454 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	FYCO1	Q9BQS8	1478 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ABCA10	Q8WWZ4	1543 aa		3.07	□□□□□ -1.92
TMEM50B-208	ENST00000474272		E9PQ18	207 aa		3.06	□□□□□ -1.92
TMEM50B-208	ENST00000474272		H3BMM5	538 aa		3.06	□□□□□ -1.92
TMEM50B-208	ENST00000474272	CTDSPL	O15194	276 aa		3.06	□□□□□ -1.92
TMEM50B-208	ENST00000474272	TEX28	O15482	410 aa		3.06	□□□□□ -1.92
TMEM50B-208	ENST00000474272	NME6	O75414	186 aa	Predicted RBP	3.06	□□□□□ -1.92
TMEM50B-208	ENST00000474272	DLAT	P10515	647 aa	Known RBP	3.06	□□□□□ -1.92
TMEM50B-208	ENST00000474272	SLC2A2	P11168	524 aa	Predicted RBP	3.06	□□□□□ -1.92
TMEM50B-208	ENST00000474272	EEF2	P13639	858 aa	Known RBP	3.06	□□□□□ -1.92
TMEM50B-208	ENST00000474272	ATP5D	P30049	168 aa		3.06	□□□□□ -1.92
TMEM50B-208	ENST00000474272	CCND3	P30281	292 aa	Predicted RBP	3.06	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms