RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 ACTN3Q08043 901 aaPredicted RBP16.33■□□□□ 0.2
CUL4A-208ENST00000474116 OASLQ15646 514 aaKnown RBP16.33■□□□□ 0.2
CUL4A-208ENST00000474116 NSDHLQ15738 373 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 ADCK2Q7Z695 626 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 RPS19BP1Q86WX3 136 aaKnown RBP16.33■□□□□ 0.2
CUL4A-208ENST00000474116 PDSS2Q86YH6 399 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 TGIF2LYQ8IUE0 185 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 MCOLN3Q8TDD5 553 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 ATG4AQ8WYN0 398 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 TM4SF19Q96DZ7 209 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 PRAP1Q96NZ9 151 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 LPAR4Q99677 370 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 FOXC2Q99958 501 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 ZNF559Q9BR84 538 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 LANCL2Q9NS86 450 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 KCNN3Q9UGI6 736 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 RNF6Q9Y252 685 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 ZNF839A8K0R7 811 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 NDC80O14777 642 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 KIF5CO60282 957 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 CATP04040 527 aaKnown RBP16.32■□□□□ 0.2
CUL4A-208ENST00000474116 HOXD4P09016 255 aaPredicted RBP16.32■□□□□ 0.2
CUL4A-208ENST00000474116 CHRNB4P30926 498 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 NAP1L1P55209 391 aaKnown RBP16.32■□□□□ 0.2
CUL4A-208ENST00000474116 TAS2R50P59544 299 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 CRADDP78560 199 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 KCNJ11Q14654 390 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 ABRAXAS2Q15018 415 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 TMEM211Q6ICI0 200 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 PRUNE1Q86TP1 453 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 CD163Q86VB7 1156 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 KIF2BQ8N4N8 673 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 FBXO15Q8NCQ5 510 aaPredicted RBP16.32■□□□□ 0.2
CUL4A-208ENST00000474116 CCDC138Q96M89 665 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 RAB6BQ9NRW1 208 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 ABCF3Q9NUQ8 709 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 TMEM184CQ9NVA4 438 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 SCN3AQ9NY46 2000 aa16.32■□□□□ 0.2
CUL4A-208ENST00000474116 ANKHD1Q8IWZ3 2542 aaKnown RBP16.32■□□□□ 0.2
CUL4A-208ENST00000474116 PRRC2AP48634 2157 aaKnown RBP16.31■□□□□ 0.2
CUL4A-208ENST00000474116 MAGEB17A8MXT2 336 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 H3BMM5 538 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 ESR1P03372 595 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 TPOP07202 933 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 APRTP07741 180 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 ETS1P14921 441 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 CHRM3P20309 590 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 TRHRP34981 398 aaPredicted RBP16.31■□□□□ 0.2
CUL4A-208ENST00000474116 CYB561P49447 251 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 ADARP55265 1226 aaKnown RBP16.31■□□□□ 0.2
CUL4A-208ENST00000474116 TYSND1Q2T9J0 566 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 CES4AQ5XG92 561 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 TMEM200AQ86VY9 491 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 POGLUT1Q8NBL1 392 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 TSLPQ969D9 159 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 LACRTQ9GZZ8 138 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 KCNJ16Q9NPI9 418 aa16.31■□□□□ 0.2
CUL4A-208ENST00000474116 PACSIN2Q9UNF0 486 aaPredicted RBP16.31■□□□□ 0.2
CUL4A-208ENST00000474116 REXO2Q9Y3B8 237 aaKnown RBP16.31■□□□□ 0.2
CUL4A-208ENST00000474116 EPN1Q9Y6I3 576 aaPredicted RBP16.31■□□□□ 0.2
CUL4A-208ENST00000474116 FAM90A27PA6NNH2 459 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 LIASO43766 372 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 RDH16O75452 317 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 CDC123O75794 336 aaPredicted RBP16.3■□□□□ 0.2
CUL4A-208ENST00000474116 IFNB1P01574 187 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 TFEBP19484 476 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 IL10P22301 178 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 CYLC1P35663 651 aaPredicted RBP16.3■□□□□ 0.2
CUL4A-208ENST00000474116 SESN2P58004 480 aaPredicted RBP16.3■□□□□ 0.2
CUL4A-208ENST00000474116 OR4D2P58180 307 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 MLF1P58340 268 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 RPS15AP62244 130 aaKnown RBP16.3■□□□□ 0.2
CUL4A-208ENST00000474116 MPP1Q00013 466 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 CMPK2Q5EBM0 449 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 SULF2Q8IWU5 870 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 REXO1L1PQ8IX06 675 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 RPRMLQ8N4K4 120 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 UBL4BQ8N7F7 174 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 KCT2Q8NC54 265 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 C16orf52Q8NHV5 167 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 RND1Q92730 232 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 THAP11Q96EK4 314 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 PEX11GQ96HA9 241 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 OR1F2PQ96R84 312 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 TCF12Q99081 682 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 ANKHQ9HCJ1 492 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 PLSCR2Q9NRY7 297 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 AMFRQ9UKV5 643 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 CRYL1Q9Y2S2 319 aa16.3■□□□□ 0.2
CUL4A-208ENST00000474116 INTS1Q8N201 2190 aaKnown RBP16.3■□□□□ 0.2
CUL4A-208ENST00000474116 GOLGA8KD6RF30 607 aa16.29■□□□□ 0.2
CUL4A-208ENST00000474116 GOLGA8TH3BQL2 631 aa16.29■□□□□ 0.2
CUL4A-208ENST00000474116 GFYI3L273 518 aa16.29■□□□□ 0.2
CUL4A-208ENST00000474116 TFECO14948 347 aaPredicted RBP16.29■□□□□ 0.2
CUL4A-208ENST00000474116 FAM155BO75949 473 aa16.29■□□□□ 0.2
CUL4A-208ENST00000474116 VAPBO95292 243 aa16.29■□□□□ 0.2
CUL4A-208ENST00000474116 KLK2P20151 261 aa16.29■□□□□ 0.2
CUL4A-208ENST00000474116 PTMSP20962 102 aa16.29■□□□□ 0.2
CUL4A-208ENST00000474116 HRH2P25021 359 aa16.29■□□□□ 0.2
CUL4A-208ENST00000474116 SKIV2L2P42285 1042 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms