RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 VPS29Q9UBQ0 182 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 FZD4Q9ULV1 537 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 SLC6A14Q9UN76 642 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 ERVW-1Q9UQF0 538 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 CCL26Q9Y258 94 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 TPRKBQ9Y3C4 175 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 NOX1Q9Y5S8 564 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 PLXNA2O75051 1894 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 FADS2P1A8MWK0 482 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 M0R3G1 203 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 RGS10O43665 173 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 FAM20BO75063 409 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 OPN1SWP03999 348 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 CTSAP10619 480 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 GRK5P34947 590 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 RPS3AP61247 264 aaKnown RBP10.55□□□□□ -0.72
C9orf3-214ENST00000473778 OCA2Q04671 838 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 RAB33AQ14088 237 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 HIST2H2ACQ16777 129 aaPredicted RBP10.55□□□□□ -0.72
C9orf3-214ENST00000473778 PROX2Q3B8N5 592 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 INAVAQ3KP66 663 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 CYP27C1Q4G0S4 372 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 ZNF385BQ569K4 471 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 XKR6Q5GH73 641 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 COX20Q5RI15 118 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.55□□□□□ -0.72
C9orf3-214ENST00000473778 HSD11B1LQ7Z5J1 315 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 NAGSQ8N159 534 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 ELMOD1Q8N336 334 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 PROX1Q92786 737 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 LGALS12Q96DT0 336 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 KCNC2Q96PR1 638 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 RNF6Q9Y252 685 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 HSPE1-MOB4S4R3N1 261 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 PLXND1Q9Y4D7 1925 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 NINQ8N4C6 2090 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 SERTM1A2A2V5 107 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 M0R082 166 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 M0R129 80 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 GBAP04062 536 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 CD36P16671 472 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 MAPK1P28482 360 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 RRM2P31350 389 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 SLC19A1P41440 591 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 PREPP48147 710 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 PPP3CCP48454 512 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 HNRNPFP52597 415 aaKnown RBP10.55□□□□□ -0.72
C9orf3-214ENST00000473778 MVDP53602 400 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 SNRPD1P62314 119 aaKnown RBP10.55□□□□□ -0.72
C9orf3-214ENST00000473778 SRSF11Q05519 484 aaKnown RBP10.55□□□□□ -0.72
C9orf3-214ENST00000473778 ABRQ12979 859 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 DOC2BQ14184 412 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 HKDC1Q2TB90 917 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 SOWAHCQ53LP3 525 aaPredicted RBP10.55□□□□□ -0.72
C9orf3-214ENST00000473778 MSANTD1Q6ZTZ1 278 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 Q6ZVL8 140 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 HTR3DQ70Z44 454 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 PRSS48Q7RTY5 328 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 THOC6Q86W42 341 aaKnown RBP10.55□□□□□ -0.72
C9orf3-214ENST00000473778 TCAIMQ8N3R3 496 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 CPA6Q8N4T0 437 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 C1orf52Q8N6N3 182 aaKnown RBP10.55□□□□□ -0.72
C9orf3-214ENST00000473778 ELMO1Q92556 727 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 DUSP26Q9BV47 211 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 TMEM121BQ9BXQ6 578 aaPredicted RBP10.55□□□□□ -0.72
C9orf3-214ENST00000473778 REEP1Q9H902 201 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 KIF17Q9P2E2 1029 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.55□□□□□ -0.72
C9orf3-214ENST00000473778 HS3ST2Q9Y278 367 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 PCDHB11Q9Y5F2 797 aa10.55□□□□□ -0.72
C9orf3-214ENST00000473778 ZBBXA8MT70 800 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 SCAMP2O15127 329 aaKnown RBP10.54□□□□□ -0.72
C9orf3-214ENST00000473778 MYCP01106 439 aaPredicted RBP10.54□□□□□ -0.72
C9orf3-214ENST00000473778 ADRA2AP08913 450 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 MPC1LP0DKB6 136 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 PABPC1P11940 636 aaKnown RBP10.54□□□□□ -0.72
C9orf3-214ENST00000473778 ETV3P41162 512 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 OR1E2P47887 323 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 ARHGDIAP52565 204 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 CTSCP53634 463 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 CRISP3P54108 245 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 EPHB3P54753 998 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 PTPN5P54829 565 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 RGNQ15493 299 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 TTC23LQ6PF05 361 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 TCEAL8Q8IYN2 117 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 GPR156Q8NFN8 814 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 RAET1EQ8TD07 263 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 MED8Q96G25 268 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 HRASLS5Q96KN8 279 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 APOL4Q9BPW4 351 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 HERC2P3Q9BVR0 1158 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 WDR12Q9GZL7 423 aaKnown RBP10.54□□□□□ -0.72
C9orf3-214ENST00000473778 RNF167Q9H6Y7 350 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 SACM1LQ9NTJ5 587 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 FAM120CQ9NX05 1096 aaKnown RBP10.54□□□□□ -0.72
C9orf3-214ENST00000473778 SCN3BQ9NY72 215 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 NDUFAF4Q9P032 175 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 RAPGEFL1Q9UHV5 662 aa10.54□□□□□ -0.72
C9orf3-214ENST00000473778 OSGIN1Q9UJX0 560 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms