RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SMYD2Q9NRG4 433 aa7.63□□□□□ -1.19
USP48-207ENST00000471752 FAM114A2Q9NRY5 505 aa7.63□□□□□ -1.19
USP48-207ENST00000471752 LANCL2Q9NS86 450 aa7.63□□□□□ -1.19
USP48-207ENST00000471752 TMEM184CQ9NVA4 438 aa7.63□□□□□ -1.19
USP48-207ENST00000471752 UTP6Q9NYH9 597 aaKnown RBP7.63□□□□□ -1.19
USP48-207ENST00000471752 PLA2G2EQ9NZK7 142 aa7.63□□□□□ -1.19
USP48-207ENST00000471752 NXT1Q9UKK6 140 aaKnown RBP7.63□□□□□ -1.19
USP48-207ENST00000471752 SNX12Q9UMY4 172 aa7.63□□□□□ -1.19
USP48-207ENST00000471752 G3BP2Q9UN86 482 aaKnown RBP7.63□□□□□ -1.19
USP48-207ENST00000471752 SLC5A6Q9Y289 635 aa7.63□□□□□ -1.19
USP48-207ENST00000471752 KCNE1BA0A087WTH5 132 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 MYOCOSA0A1B0GUC4 107 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 A0A1W2PQ72 361 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 GOLGA6L6A8MZA4 724 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 AP3B1O00203 1094 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 PRAMEF4O60810 478 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 GUCA1CO95843 209 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 IGHEP01854 428 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 EZRP15311 586 aaKnown RBP7.62□□□□□ -1.19
USP48-207ENST00000471752 PGAM1P18669 254 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 PAMP19021 973 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 SAT1P21673 171 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 VARSP26640 1264 aaKnown RBP7.62□□□□□ -1.19
USP48-207ENST00000471752 HNF4AP41235 474 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 GDF5P43026 501 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 ARG2P78540 354 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 BTG2P78543 158 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 ABATP80404 500 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 SARNPP82979 210 aaKnown RBP7.62□□□□□ -1.19
USP48-207ENST00000471752 RHAGQ02094 409 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 HYAL2Q12891 473 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 TLR1Q15399 786 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 TRADDQ15628 312 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 MINDY4Q4G0A6 757 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 RNFT1Q5M7Z0 435 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 HECTD2Q5U5R9 776 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 PRAMEF9Q5VWM5 478 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 ADNP2Q6IQ32 1131 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 HIBCHQ6NVY1 386 aaPredicted RBP7.62□□□□□ -1.19
USP48-207ENST00000471752 MAMDC2Q7Z304 686 aaPredicted RBP7.62□□□□□ -1.19
USP48-207ENST00000471752 FJX1Q86VR8 437 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 CEP97Q8IW35 865 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 RAB42Q8N4Z0 105 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 ANKRD53Q8N9V6 530 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 SLC13A3Q8WWT9 602 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 HAS2Q92819 552 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 RERGQ96A58 199 aaPredicted RBP7.62□□□□□ -1.19
USP48-207ENST00000471752 NACC2Q96BF6 587 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 SNF8Q96H20 258 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 PEX11GQ96HA9 241 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 C5orf34Q96MH7 638 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 TSNARE1Q96NA8 513 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 SLC29A3Q9BZD2 475 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 TRIM31Q9BZY9 425 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 PARVBQ9HBI1 364 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 MKKSQ9NPJ1 570 aaPredicted RBP7.62□□□□□ -1.19
USP48-207ENST00000471752 CCDC177Q9NQR7 707 aaPredicted RBP7.62□□□□□ -1.19
USP48-207ENST00000471752 STMN3Q9NZ72 180 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 KLHL42Q9P2K6 505 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 TRMT6Q9UJA5 497 aaKnown RBP7.62□□□□□ -1.19
USP48-207ENST00000471752 PYCARDQ9ULZ3 195 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 CHMP2BQ9UQN3 213 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 NAALAD2Q9Y3Q0 740 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 MTORP42345 2549 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 NF1P21359 2839 aa7.62□□□□□ -1.19
USP48-207ENST00000471752 SCN2AQ99250 2005 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 A0A0G2JN53 185 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 A8MUA0 341 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 CXorf49A8MYA2 514 aaPredicted RBP7.61□□□□□ -1.19
USP48-207ENST00000471752 TGFBR3LH3BV60 316 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 TTI1O43156 1089 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 CHST10O43529 356 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 OR1F1O43749 312 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 B4GALT2O60909 372 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 VPS26AO75436 327 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 WFS1O76024 890 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 IPO13O94829 963 aaKnown RBP7.61□□□□□ -1.19
USP48-207ENST00000471752 DDAH2O95865 285 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 TBX6O95947 436 aaPredicted RBP7.61□□□□□ -1.19
USP48-207ENST00000471752 SERPIND1P05546 499 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 ANXA5P08758 320 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 C8orf89P0DMQ9 161 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 ENO3P13929 434 aaPredicted RBP7.61□□□□□ -1.19
USP48-207ENST00000471752 FDXRP22570 491 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 HSD17B2P37059 387 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 CD96P40200 585 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 KCNC1P48547 511 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 ITGA8P53708 1063 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 RAB8AP61006 207 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 RELAQ04206 551 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 ZNF33BQ06732 778 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 PTK6Q13882 451 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 FAM53BQ14153 422 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 PPP1R7Q15435 360 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 TTLL9Q3SXZ7 439 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 DEFB134Q4QY38 66 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 MFSD4BQ5TF39 518 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 GARNL3Q5VVW2 1013 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 DMRTA1Q5VZB9 504 aa7.61□□□□□ -1.19
USP48-207ENST00000471752 SPINK14Q6IE38 97 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms