RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ATP5F1P24539 256 aaPredicted RBP14.4□□□□□ -0.1
SNX13-205ENST00000471744 EEF1DP29692 281 aaKnown RBP14.4□□□□□ -0.1
SNX13-205ENST00000471744 NAA20P61599 178 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 SKP1P63208 163 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 ZNF844Q08AG5 666 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 VAC14Q08AM6 782 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 GTF2H2Q13888 395 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 SLBPQ14493 270 aaKnown RBP eCLIP14.4□□□□□ -0.1
SNX13-205ENST00000471744 RBBP5Q15291 538 aaKnown RBP14.4□□□□□ -0.1
SNX13-205ENST00000471744 HKDC1Q2TB90 917 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 NKAIN1Q4KMZ8 207 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 CRTC2Q53ET0 693 aaPredicted RBP14.4□□□□□ -0.1
SNX13-205ENST00000471744 BEND6Q5SZJ8 279 aaPredicted RBP14.4□□□□□ -0.1
SNX13-205ENST00000471744 GTF2H2CQ6P1K8 395 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 TMEM151AQ8N4L1 468 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 RDH11Q8TC12 318 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 FKBP10Q96AY3 582 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 RNF31Q96EP0 1072 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 C10orf90Q96M02 699 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 C1QTNF3Q9BXJ4 246 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 DRC3Q9H069 523 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 IFT80Q9P2H3 777 aaPredicted RBP14.4□□□□□ -0.1
SNX13-205ENST00000471744 ASB1Q9Y576 335 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 DMXL2Q8TDJ6 3036 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 WDFY3Q8IZQ1 3526 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 ASPMQ8IZT6 3477 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 K7ENP7 123 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 E2F3O00716 465 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 RGS16O15492 202 aaPredicted RBP14.39□□□□□ -0.11
SNX13-205ENST00000471744 P2RX6O15547 441 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 NDUFS4O43181 175 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 EFSO43281 561 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 WFS1O76024 890 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 ALBP02768 609 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 RPS17P08708 135 aaKnown RBP14.39□□□□□ -0.11
SNX13-205ENST00000471744 SBK3P0C264 359 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 EPORP19235 508 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 VARSP26640 1264 aaKnown RBP14.39□□□□□ -0.11
SNX13-205ENST00000471744 PTPN4P29074 926 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 SERPINB1P30740 379 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 HNF4AP41235 474 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 HERVK_113P63132 956 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 DOC2AQ14183 400 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 NCF4Q15080 339 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 C1orf189Q5VU69 101 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 LIPJQ5W064 366 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 FAM199XQ6PEV8 388 aaPredicted RBP14.39□□□□□ -0.11
SNX13-205ENST00000471744 INO80CQ6PI98 192 aaPredicted RBP14.39□□□□□ -0.11
SNX13-205ENST00000471744 FAM198BQ6UWH4 519 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 GOLGA7Q7Z5G4 137 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 SRRM1Q8IYB3 904 aaKnown RBP14.39□□□□□ -0.11
SNX13-205ENST00000471744 C4orf33Q8N1A6 199 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 ZNF740Q8NDX6 193 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 NT5CQ8TCD5 201 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 SNRNP27Q8WVK2 155 aaKnown RBP14.39□□□□□ -0.11
SNX13-205ENST00000471744 APOPT1Q96IL0 206 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 MAGEB10Q96LZ2 347 aaPredicted RBP14.39□□□□□ -0.11
SNX13-205ENST00000471744 SMC6Q96SB8 1091 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 ERVK-6Q9BXR3 956 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 SPNS1Q9H2V7 528 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 SYNPO2LQ9H987 977 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 ZNF304Q9HCX3 659 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 ARGLU1Q9NWB6 273 aaPredicted RBP14.39□□□□□ -0.11
SNX13-205ENST00000471744 ADGRE2Q9UHX3 823 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 FARSAQ9Y285 508 aaKnown RBP14.39□□□□□ -0.11
SNX13-205ENST00000471744 SLC22A7Q9Y694 548 aa14.39□□□□□ -0.11
SNX13-205ENST00000471744 ANKDD1BA6NHY2 528 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 PLIN3O60664 434 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 CLEC3AO75596 197 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 SIX3O95343 332 aaPredicted RBP14.38□□□□□ -0.11
SNX13-205ENST00000471744 SERPINA6P08185 405 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 MYZAPP0CAP1 466 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 MYL2P10916 166 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 AVPR1BP47901 424 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 STXBP1P61764 594 aaKnown RBP14.38□□□□□ -0.11
SNX13-205ENST00000471744 HERC3Q15034 1050 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 CEP85LQ5SZL2 805 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 GRHL2Q6ISB3 625 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 TMEM214Q6NUQ4 689 aaKnown RBP14.38□□□□□ -0.11
SNX13-205ENST00000471744 C16orf46Q6P387 395 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 ABHD13Q7L211 337 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 SYVN1Q86TM6 617 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 ARHGEF39Q8N4T4 335 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 ANKRD53Q8N9V6 530 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 MYRIPQ8NFW9 859 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 PPP4R1Q8TF05 950 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 STARD8Q92502 1023 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 ATP6V1E2Q96A05 226 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 REPS1Q96D71 796 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 ZIM3Q96PE6 472 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 RUFY1Q96T51 708 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 STMN4Q9H169 189 aaPredicted RBP14.38□□□□□ -0.11
SNX13-205ENST00000471744 RHBGQ9H310 441 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 IPPKQ9H8X2 491 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 ACTR8Q9H981 624 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 AKIRIN1Q9H9L7 192 aaPredicted RBP14.38□□□□□ -0.11
SNX13-205ENST00000471744 ANKHQ9HCJ1 492 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 IL17BQ9UHF5 180 aa14.38□□□□□ -0.11
SNX13-205ENST00000471744 NXT1Q9UKK6 140 aaKnown RBP14.38□□□□□ -0.11
SNX13-205ENST00000471744 PCTPQ9UKL6 214 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms