RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 FFAR3O14843 346 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 GPR42O15529 346 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 LIASO43766 372 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 SEC24DO94855 1032 aaPredicted RBP8.62□□□□□ -1.03
CPSF4-211ENST00000471455 MATN4O95460 622 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 NSA2O95478 260 aaKnown RBP8.62□□□□□ -1.03
CPSF4-211ENST00000471455 CELA2AP08217 269 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 ABOP16442 354 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 PAMP19021 973 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 CHRM3P20309 590 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 PNLIPRP1P54315 467 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 ADARP55265 1226 aaKnown RBP8.62□□□□□ -1.03
CPSF4-211ENST00000471455 SESN2P58004 480 aaPredicted RBP8.62□□□□□ -1.03
CPSF4-211ENST00000471455 SKP1P63208 163 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 PRDX1Q06830 199 aaKnown RBP8.62□□□□□ -1.03
CPSF4-211ENST00000471455 KIF5AQ12840 1032 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 C3AR1Q16581 482 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 HKDC1Q2TB90 917 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 CCSMST1Q4G0I0 132 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 ACER2Q5QJU3 275 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 THEMIS2Q5TEJ8 643 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 ARMC3Q5W041 872 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 ZNF425Q6IV72 752 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 Q6ZPB1 254 aaPredicted RBP8.62□□□□□ -1.03
CPSF4-211ENST00000471455 CPEB2Q7Z5Q1 589 aaKnown RBP8.62□□□□□ -1.03
CPSF4-211ENST00000471455 CDH24Q86UP0 819 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 SPPL2CQ8IUH8 684 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 CEP97Q8IW35 865 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 LGI4Q8N135 537 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 BEST3Q8N1M1 668 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 RNF214Q8ND24 703 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 PHF10Q8WUB8 498 aaKnown RBP8.62□□□□□ -1.03
CPSF4-211ENST00000471455 ZNF778Q96MU6 729 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 OR2A5Q96R48 311 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 SPOCK3Q9BQ16 436 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 GSX2Q9BZM3 304 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 FAM129AQ9BZQ8 928 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 KCNK13Q9HB14 408 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 CHRAC1Q9NRG0 131 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 TREX1Q9NSU2 369 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 COQ3Q9NZJ6 369 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 STOX2Q9P2F5 926 aaPredicted RBP8.62□□□□□ -1.03
CPSF4-211ENST00000471455 TAC3Q9UHF0 121 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 TINAGQ9UJW2 476 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 MEMO1Q9Y316 297 aa8.62□□□□□ -1.03
CPSF4-211ENST00000471455 ASPDHA6ND91 283 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 SOWAHDA6NJG2 315 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 ARHGEF33A8MVX0 844 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 PRRG2O14669 202 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 KIF5CO60282 957 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 NRP2O60462 931 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 PSIP1O75475 530 aaKnown RBP8.61□□□□□ -1.03
CPSF4-211ENST00000471455 TSPAN12O95859 305 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 OGNP20774 298 aaKnown RBP8.61□□□□□ -1.03
CPSF4-211ENST00000471455 IL10P22301 178 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 GRIA1P42261 906 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 NPY2RP49146 381 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 RPS15AP62244 130 aaKnown RBP8.61□□□□□ -1.03
CPSF4-211ENST00000471455 ADORA2A-AS1P86434 159 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 PMP22Q01453 160 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 OC90Q02509 493 aaPredicted RBP8.61□□□□□ -1.03
CPSF4-211ENST00000471455 TUBA3CQ13748 450 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 FASTKQ14296 549 aaKnown RBP8.61□□□□□ -1.03
CPSF4-211ENST00000471455 GBX1Q14549 363 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 OR1C1Q15619 314 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 OASLQ15646 514 aaKnown RBP8.61□□□□□ -1.03
CPSF4-211ENST00000471455 C11orf91Q3C1V1 193 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.61□□□□□ -1.03
CPSF4-211ENST00000471455 CTSL3PQ5NE16 218 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 TUBA3EQ6PEY2 450 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 SUSD1Q6UWL2 747 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 SPNS3Q6ZMD2 512 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 GHDCQ8N2G8 530 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 FBXO15Q8NCQ5 510 aaPredicted RBP8.61□□□□□ -1.03
CPSF4-211ENST00000471455 M1APQ8TC57 530 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 ATG4AQ8WYN0 398 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 LPGAT1Q92604 370 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 LPAR4Q99677 370 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 TSGA10Q9BZW7 698 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 VN1R1Q9GZP7 353 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 PCBD2Q9H0N5 130 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 CCDC68Q9H2F9 335 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 ANKHQ9HCJ1 492 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 ZNF835Q9Y2P0 537 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 DUSP10Q9Y6W6 482 aa8.61□□□□□ -1.03
CPSF4-211ENST00000471455 NCOA6Q14686 2063 aaPredicted RBP8.6□□□□□ -1.03
CPSF4-211ENST00000471455 HEATR5BQ9P2D3 2071 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 IGKV1-8A0A0C4DH67 115 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 A0A0U1RQJ8 604 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 NPIPA5E9PKD4 350 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 E9PLN8 166 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 FOXS1O43638 330 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 NIPSNAP2O75323 286 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 VAPBO95292 243 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 SLC16A8O95907 504 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 SYF2O95926 243 aaKnown RBP8.6□□□□□ -1.03
CPSF4-211ENST00000471455 FTCDO95954 541 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 ENO3P13929 434 aaPredicted RBP8.6□□□□□ -1.03
CPSF4-211ENST00000471455 ZNF24P17028 368 aa8.6□□□□□ -1.03
CPSF4-211ENST00000471455 FMO4P31512 558 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms