RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 WDHD1O75717 1129 aaPredicted RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 CELF2O95319 508 aaKnown RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 STARD3NLO95772 234 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 SERPING1P05155 500 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 RPLP0P05388 317 aaKnown RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 NR2F1P10589 423 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 CD59P13987 128 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 C4BPBP20851 252 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 EEF1B2P24534 225 aaKnown RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 EDNRAP25101 427 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 PKLRP30613 574 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 GPR183P32249 361 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 NDUFV3P56181 108 aaKnown RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 CLDN17P56750 224 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 UBASH3AP57075 661 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 ILF2Q12905 390 aaKnown RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 SIX1Q15475 284 aaPredicted RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 PTGISQ16647 500 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 FAM106AQ4KMX7 169 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 LACTB2Q53H82 288 aaPredicted RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 FGD3Q5JSP0 725 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 C9orf152Q5JTZ5 239 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 ERMARDQ5T6L9 678 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 RNLSQ5VYX0 342 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 CYB5D1Q6P9G0 228 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 REG3GQ6UW15 175 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 VITQ6UXI7 678 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 PLPPR4Q7Z2D5 763 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 CPEB2Q7Z5Q1 589 aaKnown RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 ADCK1Q86TW2 530 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 CATSPER3Q86XQ3 398 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 CERS3Q8IU89 383 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 CCDC60Q8IWA6 550 aaPredicted RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 SLC22A15Q8IZD6 547 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 MAML2Q8IZL2 1156 aaPredicted RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 FGFRL1Q8N441 504 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 ANKRD13CQ8N6S4 541 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 GBP7Q8N8V2 638 aaPredicted RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 AVL9Q8NBF6 648 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 XXYLT1Q8NBI6 393 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 POGLUT1Q8NBL1 392 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 OR9Q2Q8NGE9 314 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 SSC4DQ8WTU2 575 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.1□□□□□ -2.23
UBXN4-207ENST00000471246 SEPT1Q8WYJ6 367 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 NSMAFQ92636 917 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 PYCR2Q96C36 320 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 SPATA33Q96N06 139 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 UBAC1Q9BSL1 405 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 CCDC28BQ9BUN5 200 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 SDCBP2Q9H190 292 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 ACTL8Q9H568 366 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 RNF121Q9H920 327 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 ABCB10Q9NRK6 738 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 TNFRSF19Q9NS68 423 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 TBC1D7Q9P0N9 293 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 MORF4L1Q9UBU8 362 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 IL36AQ9UHA7 158 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 PILRBQ9UKJ0 227 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 PILRAQ9UKJ1 303 aa1.1□□□□□ -2.23
UBXN4-207ENST00000471246 hCG_38984A0A1B0GV85 526 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 ARHGEF33A8MVX0 844 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 F8VVB4 439 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 F8VWA3 439 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 MAGEB2O15479 319 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 SH3BP5O60239 455 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 SH3BGRLO75368 114 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 MTRF1O75570 445 aaKnown RBP1.09□□□□□ -2.23
UBXN4-207ENST00000471246 PRDM1O75626 825 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 OR52Z1P0C646 297 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 STAG3L1P0CL83 205 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 ADORA3P0DMS8 318 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 F3P13726 295 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 PRG2P13727 222 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 MYL6BP14649 208 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 CPT2P23786 658 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 LMO2P25791 158 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 SFTPDP35247 375 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 LIMK1P53667 647 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 TRA2BP62995 288 aaKnown RBP1.09□□□□□ -2.23
UBXN4-207ENST00000471246 SRPXP78539 464 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 DLK1P80370 383 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 CACNG1Q06432 222 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 BECN1Q14457 450 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 MLF2Q15773 248 aaPredicted RBP1.09□□□□□ -2.23
UBXN4-207ENST00000471246 RBBP7Q16576 425 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 C3AR1Q16581 482 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 DUSP5Q16690 384 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 KRTAP21-2Q3LI59 83 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 SPANXN4Q5MJ08 99 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 ARMC4Q5T2S8 1044 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 WDR78Q5VTH9 848 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 SUSD4Q5VX71 490 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 NAA16Q6N069 864 aaPredicted RBP1.09□□□□□ -2.23
UBXN4-207ENST00000471246 TTC27Q6P3X3 843 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 PRSS55Q6UWB4 352 aaPredicted RBP1.09□□□□□ -2.23
UBXN4-207ENST00000471246 BAIAP2L2Q6UXY1 529 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 RBPMS2Q6ZRY4 209 aaKnown RBP1.09□□□□□ -2.23
UBXN4-207ENST00000471246 ENOSF1Q7L5Y1 443 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 PIGWQ7Z7B1 504 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms