RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 IL1RNP18510 177 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 ITGA3P26006 1051 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 MAGEA4P43358 317 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 SLC6A12P48065 614 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 HNMTP50135 292 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 EMP2P54851 167 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 SLC12A2P55011 1212 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 MAT1AQ00266 395 aaKnown RBP13.32□□□□□ -0.28
COMMD3-208ENST00000470045 REEP5Q00765 189 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 MEF2AQ02078 507 aaPredicted RBP13.32□□□□□ -0.28
COMMD3-208ENST00000470045 C8orf74Q6P047 294 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 TMEM205Q6UW68 189 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 CLEC18BQ6UXF7 455 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 THOC6Q86W42 341 aaKnown RBP13.32□□□□□ -0.28
COMMD3-208ENST00000470045 PDSS2Q86YH6 399 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 AFAP1L2Q8N4X5 818 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 CLEC18CQ8NCF0 446 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 SLC13A3Q8WWT9 602 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 C8orf44Q96CB5 159 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 RHBDF1Q96CC6 855 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 LHPPQ9H008 270 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 CAB39LQ9H9S4 337 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 PELI2Q9HAT8 420 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 ZBTB20Q9HC78 741 aaPredicted RBP13.32□□□□□ -0.28
COMMD3-208ENST00000470045 ZDHHC18Q9NUE0 388 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 TXNDC16Q9P2K2 825 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 PTPN13Q12923 2485 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 IGHV1-45A0A0A0MS14 117 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 ESYT3A0FGR9 886 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 PHGDHO43175 533 aaKnown RBP13.31□□□□□ -0.28
COMMD3-208ENST00000470045 STMN1P16949 149 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 STX2P32856 288 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 AHRP35869 848 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 SCTRP47872 440 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 NAB1Q13506 487 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 PWP1Q13610 501 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 CSHL1Q14406 222 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 USP10Q14694 798 aaKnown RBP13.31□□□□□ -0.28
COMMD3-208ENST00000470045 TGFBIQ15582 683 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 WHAMMP3Q1A5X7 153 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 KBTBD12Q3ZCT8 623 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 Q6ZS92 163 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 CCDC25Q86WR0 208 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 ZNF740Q8NDX6 193 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 ZCCHC10Q8TBK6 192 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 NT5CQ8TCD5 201 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 CPT1CQ8TCG5 803 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 TM9SF4Q92544 642 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 MOCOSQ96EN8 888 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 UBXN10Q96LJ8 280 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 TSNARE1Q96NA8 513 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 EGFL8Q99944 293 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 LRRC1Q9BTT6 524 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 MFRPQ9BY79 579 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 ZNF160Q9HCG1 818 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 ZFP69BQ9UJL9 534 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 SLC22A14Q9Y267 594 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 B3GNT3Q9Y2A9 372 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 KCNE2Q9Y6J6 123 aa13.31□□□□□ -0.28
COMMD3-208ENST00000470045 PRRC2CQ9Y520 2896 aaKnown RBP13.31□□□□□ -0.28
COMMD3-208ENST00000470045 RELNP78509 3460 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 NSG1A0A0A6YYJ2 146 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 NDUFS4O43181 175 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 OR1F1O43749 312 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 JRKO75564 520 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 URI1O94763 535 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-208ENST00000470045 KLHL18O94889 574 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 HEXBP07686 556 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 CCDC166P0CW27 439 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 CD1DP15813 335 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 SPRP35270 261 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-208ENST00000470045 GGT5P36269 586 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 RAB10P61026 200 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 ATP6V0D1P61421 351 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 SLC7A5Q01650 507 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 HERC3Q15034 1050 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 PCOLCEQ15113 449 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 INPP5JQ15735 1006 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-208ENST00000470045 PLEKHN1Q494U1 663 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-208ENST00000470045 PRR30Q53SZ7 412 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-208ENST00000470045 CRB2Q5IJ48 1285 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 CDKL4Q5MAI5 379 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 GRTP1Q5TC63 336 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 AGAP7PQ5VUJ5 663 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 NXPE4Q6UWF7 544 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 FRA10AC1Q70Z53 315 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 NDUFAF7Q7L592 441 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 TMPRSS11BQ86T26 416 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 ATCAYQ86WG3 371 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 PARP9Q8IXQ6 854 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 SHISA5Q8N114 240 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 ZADH2Q8N4Q0 377 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 TBC1D19Q8N5T2 526 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 ANKRD53Q8N9V6 530 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 GALNT11Q8NCW6 608 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 OR51Q1Q8NH59 317 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 FBF1Q8TES7 1133 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 PPP4R1Q8TF05 950 aa13.3□□□□□ -0.28
COMMD3-208ENST00000470045 THOC3Q96J01 351 aaKnown RBP13.3□□□□□ -0.28
COMMD3-208ENST00000470045 AGAP4Q96P64 663 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms