RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 N4BP2L2Q92802 583 aaPredicted RBP14.11□□□□□ -0.15
COL9A3-209ENST00000469852 C10orf90Q96M02 699 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 SLC46A1Q96NT5 459 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 C20orf27Q9GZN8 174 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 NRSN2Q9GZP1 204 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 NT5DC2Q9H857 520 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 FANCEQ9HB96 536 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 MID1IP1Q9NPA3 183 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 ZFP69BQ9UJL9 534 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 ZMIZ1Q9ULJ6 1067 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 RUVBL1Q9Y265 456 aaKnown RBP14.11□□□□□ -0.15
COL9A3-209ENST00000469852 AP1M2Q9Y6Q5 423 aa14.11□□□□□ -0.15
COL9A3-209ENST00000469852 TEX51A0A1B0GUA7 166 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 FITM1A5D6W6 292 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 CDRT15L2A8MXV6 281 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 C4orf51C9J302 202 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 ZSCAN9O15535 394 aaPredicted RBP14.1□□□□□ -0.15
COL9A3-209ENST00000469852 NDUFS4O43181 175 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 ZNF749O43361 778 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 NPHS1O60500 1241 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 SRPX2O60687 465 aaPredicted RBP14.1□□□□□ -0.15
COL9A3-209ENST00000469852 UGDHO60701 494 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 SCRG1O75711 98 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 MLYCDO95822 493 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 NTRK1P04629 796 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 SERPINE1P05121 402 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 SERPIND1P05546 499 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 PCNAP12004 261 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 CXCR2P25025 360 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 HNF4AP41235 474 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 HTR6P50406 440 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 ATP1A2P50993 1020 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 NEK2P51955 445 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 RAB15P59190 212 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 ASPHQ12797 758 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 LAPTM5Q13571 262 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 RCN2Q14257 317 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.1□□□□□ -0.15
COL9A3-209ENST00000469852 GGTA1PQ4G0N0 100 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 ARL13AQ5H913 290 aaPredicted RBP14.1□□□□□ -0.15
COL9A3-209ENST00000469852 DCAF12Q5T6F0 453 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 MED27Q6P2C8 311 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 CEACAM20Q6UY09 585 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 ASPGQ86U10 573 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 CDYL2Q8N8U2 506 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 KCT2Q8NC54 265 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 WDR20Q8TBZ3 569 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 SLC13A3Q8WWT9 602 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 GATA6Q92908 595 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 MTFMTQ96DP5 389 aaKnown RBP14.1□□□□□ -0.15
COL9A3-209ENST00000469852 THAP11Q96EK4 314 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 CNDP1Q96KN2 507 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 DDA1Q9BW61 102 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 DRC3Q9H069 523 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 MED4Q9NPJ6 270 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 ENAMQ9NRM1 1142 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 FARSBQ9NSD9 589 aaKnown RBP14.1□□□□□ -0.15
COL9A3-209ENST00000469852 IRAK4Q9NWZ3 460 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 TRPS1Q9UHF7 1281 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 SERTAD3Q9UJW9 196 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 TIMM22Q9Y584 194 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 PCDHGA3Q9Y5H0 932 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 FREM2Q5SZK8 3169 aa14.1□□□□□ -0.15
COL9A3-209ENST00000469852 TMEM233B4DJY2 109 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 H0YIV9 168 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 SH3BGRLO75368 114 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 KIAA0754O94854 1291 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 ESRRBO95718 433 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 B3GALT4O96024 378 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 CAPN1P07384 714 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 SLC5A2P31639 672 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 AHRP35869 848 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 PKNOX1P55347 436 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 BST1Q10588 318 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 DDX39BQ13838 428 aaKnown RBP14.09□□□□□ -0.15
COL9A3-209ENST00000469852 HSP90B2PQ58FF3 399 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 PAGE2BQ5JRK9 111 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 TCTE1Q5JU00 501 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 CLEC6AQ6EIG7 209 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 IGF2-ASQ6U949 168 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 CUZD1Q86UP6 607 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 TMEM126BQ8IUX1 230 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 SHISA5Q8N114 240 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 OR8K5Q8NH50 307 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 HUS1BQ8NHY5 278 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 PPP1R14CQ8TAE6 165 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 ZNF473Q8WTR7 871 aaKnown RBP14.09□□□□□ -0.15
COL9A3-209ENST00000469852 RERGQ96A58 199 aaPredicted RBP14.09□□□□□ -0.15
COL9A3-209ENST00000469852 HBEGFQ99075 208 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 MTERF1Q99551 399 aaKnown RBP14.09□□□□□ -0.15
COL9A3-209ENST00000469852 SPRY4Q9C004 299 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 RHBGQ9H310 441 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 KLHL31Q9H511 634 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 AKIRIN1Q9H9L7 192 aaPredicted RBP14.09□□□□□ -0.15
COL9A3-209ENST00000469852 DHCR7Q9UBM7 475 aaKnown RBP14.09□□□□□ -0.15
COL9A3-209ENST00000469852 AK5Q9Y6K8 562 aa14.09□□□□□ -0.15
COL9A3-209ENST00000469852 IGF2RP11717 2491 aa14.08□□□□□ -0.15
COL9A3-209ENST00000469852 DXOO77932 396 aaKnown RBP14.08□□□□□ -0.16
COL9A3-209ENST00000469852 ETHE1O95571 254 aa14.08□□□□□ -0.16
COL9A3-209ENST00000469852 DLGAP3O95886 979 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms