RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 PTGFRNQ9P2B2 879 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 IKZF3Q9UKT9 509 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 VWA7Q9Y334 891 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 PSAT1Q9Y617 370 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 SLC22A7Q9Y694 548 aa15.42■□□□□ 0.06
COL9A3-208ENST00000469802 CROCCQ5TZA2 2017 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 CCDC188H7C350 402 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 TTI1O43156 1089 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 HIST1H2AGP0C0S8 130 aaPredicted RBP15.41■□□□□ 0.06
COL9A3-208ENST00000469802 C8orf89P0DMQ9 161 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 HIST1H2ADP20671 130 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 XCR1P46094 333 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 TNFSF10P50591 281 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 ARL4CP56559 192 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 GNG11P61952 73 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 TMEM207Q6UWW9 146 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 SLC26A11Q86WA9 606 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 AFAP1L2Q8N4X5 818 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 SIRT6Q8N6T7 355 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 CATSPER1Q8NEC5 780 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 ZCCHC10Q8TBK6 192 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 FAR1Q8WVX9 515 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 PYCR2Q96C36 320 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 HIST1H2AHQ96KK5 128 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 NAPGQ99747 312 aaPredicted RBP15.41■□□□□ 0.06
COL9A3-208ENST00000469802 HIST1H2AJQ99878 128 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 MCMBPQ9BTE3 642 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 H2AFJQ9BTM1 129 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 TUBB6Q9BUF5 446 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 RNF32Q9H0A6 362 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 HCN3Q9P1Z3 774 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 SAR1BQ9Y6B6 198 aa15.41■□□□□ 0.06
COL9A3-208ENST00000469802 DIDO1Q9BTC0 2240 aaKnown RBP15.41■□□□□ 0.06
COL9A3-208ENST00000469802 SGK494L7N484 410 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 RDH16O75452 317 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 SLC35G6P0C7Q6 338 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 ITGAMP11215 1152 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 EDN3P14138 238 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 GRK3P35626 688 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 CCR8P51685 355 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 AP2B1P63010 937 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 ARG2P78540 354 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 FASTKD3Q14CZ7 662 aaKnown RBP15.4■□□□□ 0.06
COL9A3-208ENST00000469802 INAQ16352 499 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 ZNF324BQ6AW86 544 aaPredicted RBP15.4■□□□□ 0.06
COL9A3-208ENST00000469802 HIST2H2BCQ6DN03 193 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 LANCL3Q6ZV70 420 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 STRA8Q7Z7C7 330 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 ZC3HC1Q86WB0 502 aaKnown RBP15.4■□□□□ 0.06
COL9A3-208ENST00000469802 AMER2Q8N7J2 671 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 OR51Q1Q8NH59 317 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 SLC13A3Q8WWT9 602 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 ATL1Q8WXF7 558 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 HAS2Q92819 552 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 ALKBH8Q96BT7 664 aaKnown RBP15.4■□□□□ 0.06
COL9A3-208ENST00000469802 SPNS1Q9H2V7 528 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 ANKHQ9HCJ1 492 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 MOCS1Q9NZB8 636 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 ZFATQ9P243 1243 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 SLC5A6Q9Y289 635 aa15.4■□□□□ 0.06
COL9A3-208ENST00000469802 TEX15Q9BXT5 2789 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 TRBC2A0A5B9 178 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 DYTNA2CJ06 578 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 ICAM2P13598 275 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 RPL21P46778 160 aaKnown RBP15.39■□□□□ 0.05
COL9A3-208ENST00000469802 MEF2AQ02078 507 aaPredicted RBP15.39■□□□□ 0.05
COL9A3-208ENST00000469802 MGAT5Q09328 741 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 ELOAQ14241 798 aaKnown RBP15.39■□□□□ 0.05
COL9A3-208ENST00000469802 PLAG1Q6DJT9 500 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 CPEB2Q7Z5Q1 589 aaKnown RBP15.39■□□□□ 0.05
COL9A3-208ENST00000469802 ANKMY2Q8IV38 441 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 ZNF740Q8NDX6 193 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 FBXO36Q8NEA4 188 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 METTL21AQ8WXB1 218 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 ANKRD7Q92527 254 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 NEIL2Q969S2 332 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 MOCOSQ96EN8 888 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 CYTH2Q99418 400 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 TRIM54Q9BYV2 358 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 LANCL2Q9NS86 450 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 PLA2G3Q9NZ20 509 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 NAALAD2Q9Y3Q0 740 aa15.39■□□□□ 0.05
COL9A3-208ENST00000469802 TRAV17A0A0B4J275 112 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 FAM95CA0A1B0GW59 222 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 NDUFS4O43181 175 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 SEC24DO94855 1032 aaPredicted RBP15.38■□□□□ 0.05
COL9A3-208ENST00000469802 REEP5Q00765 189 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 RHAGQ02094 409 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 PDIA2Q13087 525 aaKnown RBP15.38■□□□□ 0.05
COL9A3-208ENST00000469802 PWP1Q13610 501 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 HERC3Q15034 1050 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 MINDY4Q4G0A6 757 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 CATSPEREQ5SY80 951 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 FAM180AQ6UWF9 173 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 ANKRD37Q7Z713 158 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 OR1N1Q8NGS0 311 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 NT5CQ8TCD5 201 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 SLC5A11Q8WWX8 675 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 C5orf34Q96MH7 638 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 OR1F2PQ96R84 312 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms