RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-210	ENST00000468965	WASHC2D	Q5SRD0	308 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	MED27	Q6P2C8	311 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	CUZD1	Q86UP6	607 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	PPP1R3B	Q86XI6	285 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	RNF175	Q8N4F7	328 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	ARHGEF39	Q8N4T4	335 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	CSNK1A1L	Q8N752	337 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	CDYL2	Q8N8U2	506 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	OR7G3	Q8NG95	312 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	WDR20	Q8TBZ3	569 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	CREB3L4	Q8TEY5	395 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	N4BP2L2	Q92802	583 aa	Predicted RBP	12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	USP7	Q93009	1102 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	MAGEB18	Q96M61	343 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	TAAR9	Q96RI9	348 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	KCNA7	Q96RP8	456 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	TRMO	Q9BU70	441 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	RHBG	Q9H310	441 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	FANCE	Q9HB96	536 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	ZFP69B	Q9UJL9	534 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	STK38L	Q9Y2H1	464 aa		12.5	□□□□□ -0.41
SCAP-210	ENST00000468965	TMEM114	B3SHH9	223 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	OR2B3	O76000	313 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	TNFSF15	O95150	251 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	MED26	O95402	600 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	EIF2S1	P05198	315 aa	Known RBP	12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	ENO1	P06733	434 aa	Known RBP	12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	CAPN1	P07384	714 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	PCNA	P12004	261 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	NEFH	P12036	1026 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	ZNF28	P17035	718 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	GRK2	P25098	689 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	HTR6	P50406	440 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	RAB15	P59190	212 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	ABCE1	P61221	599 aa	Known RBP	12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	GALNT1	Q10472	559 aa	Predicted RBP	12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	HYAL2	Q12891	473 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	STX3	Q13277	289 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	RTP5	Q14D33	572 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	HIST2H2AC	Q16777	129 aa	Predicted RBP	12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	HKDC1	Q2TB90	917 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	HIST2H2AA3	Q6FI13	130 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	PWWP2B	Q6NUJ5	590 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	ASPG	Q86U10	573 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	TBC1D19	Q8N5T2	526 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	ZNF655	Q8N720	491 aa	Predicted RBP	12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	TTL	Q8NG68	377 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	OR8K5	Q8NH50	307 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	NT5C	Q8TCD5	201 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	LRRC8C	Q8TDW0	803 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	ZNF473	Q8WTR7	871 aa	Known RBP	12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	SLC13A3	Q8WWT9	602 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	UBE2E3	Q969T4	207 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	RERG	Q96A58	199 aa	Predicted RBP	12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	C10orf90	Q96M02	699 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	SORT1	Q99523	831 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	DDA1	Q9BW61	102 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	SLC29A3	Q9BZD2	475 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	NRSN2	Q9GZP1	204 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	ASCL3	Q9NQ33	180 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	FARSB	Q9NSD9	589 aa	Known RBP	12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	FOXJ2	Q9P0K8	574 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	SERTAD3	Q9UJW9	196 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	RUVBL1	Q9Y265	456 aa	Known RBP	12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	TSC22D4	Q9Y3Q8	395 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	NEUROG3	Q9Y4Z2	214 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	TIMM22	Q9Y584	194 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	PCDHGA3	Q9Y5H0	932 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	PCDHGA11	Q9Y5H2	935 aa		12.49	□□□□□ -0.41
SCAP-210	ENST00000468965	NCOR2	Q9Y618	2525 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	TRABD2B	A6NFA1	517 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	ANKDD1B	A6NHY2	528 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	SRRM3	A6NNA2	597 aa	Predicted RBP	12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	CDRT15L2	A8MXV6	281 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	TMEM233	B4DJY2	109 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	C4orf51	C9J302	202 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	MANBA	O00462	879 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	ZSCAN9	O15535	394 aa	Predicted RBP	12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	NDUFS4	O43181	175 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	SNN	O75324	88 aa	Predicted RBP	12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	HMOX2	P30519	316 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	SLC1A6	P48664	564 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	NEK2	P51955	445 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	DDX39B	Q13838	428 aa	Known RBP	12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	TCTE1	Q5JU00	501 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	DCAF12	Q5T6F0	453 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	FRG2	Q64ET8	278 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	CLEC6A	Q6EIG7	209 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	CYB5D1	Q6P9G0	228 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	IGF2-AS	Q6U949	168 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	CEACAM20	Q6UY09	585 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	RGS9BP	Q6ZS82	235 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	BPHL	Q86WA6	291 aa	Predicted RBP	12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	TRIM42	Q8IWZ5	723 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	GPR135	Q8IZ08	494 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	DTWD1	Q8N5C7	304 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	KCT2	Q8NC54	265 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	CAMKV	Q8NCB2	501 aa		12.48	□□□□□ -0.41
SCAP-210	ENST00000468965	TRPV3	Q8NET8	790 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms