RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SPC24Q8NBT2 197 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 OR1L3Q8NH93 324 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 SAP25Q8TEE9 199 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 UBLCP1Q8WVY7 318 aaPredicted RBP4.51□□□□□ -1.69
LSM5-209ENST00000468872 METTL21AQ8WXB1 218 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 GIMAP5Q96F15 307 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 C10orf90Q96M02 699 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 CDCA3Q99618 268 aaPredicted RBP4.51□□□□□ -1.69
LSM5-209ENST00000468872 UBQLN3Q9H347 655 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 ATP13A3Q9H7F0 1226 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 RNF121Q9H920 327 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 ZNF71Q9NQZ8 489 aaPredicted RBP4.51□□□□□ -1.69
LSM5-209ENST00000468872 OR6C2Q9NZP2 312 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 C19orf25Q9UFG5 118 aaPredicted RBP4.51□□□□□ -1.69
LSM5-209ENST00000468872 PPP2R2CQ9Y2T4 447 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 C2CD2Q9Y426 696 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 MSGN1A6NI15 193 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 NPIPA3F8WFD2 350 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 H3BMM5 538 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 BLOC1S5-TXNDC5H3BN57 136 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 KLF11O14901 512 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 EPHB6O15197 1021 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 ACSL4O60488 711 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 PRSS56P0CW18 603 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 SERPINB6P35237 376 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 CETN2P41208 172 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 CASP3P42574 277 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 MAGEB1P43366 347 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 LBX1P52954 281 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 MYL7Q01449 175 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 UBXN1Q04323 297 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 ACTN3Q08043 901 aaPredicted RBP4.5□□□□□ -1.69
LSM5-209ENST00000468872 LASP1Q14847 261 aaKnown RBP4.5□□□□□ -1.69
LSM5-209ENST00000468872 OR4C11Q6IEV9 310 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 KLHL10Q6JEL2 608 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 PLBD1Q6P4A8 553 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 RAPH1Q70E73 1250 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 PRUNE1Q86TP1 453 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 APLFQ8IW19 511 aaPredicted RBP4.5□□□□□ -1.69
LSM5-209ENST00000468872 SLC37A3Q8NCC5 494 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 CKAP2Q8WWK9 683 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 DYRK2Q92630 601 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 PDLIM5Q96HC4 596 aaKnown RBP4.5□□□□□ -1.69
LSM5-209ENST00000468872 CCDC43Q96MW1 224 aaKnown RBP4.5□□□□□ -1.69
LSM5-209ENST00000468872 TSSK2Q96PF2 358 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 BTBD9Q96Q07 612 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 PANX3Q96QZ0 392 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 ALKBH7Q9BT30 221 aaPredicted RBP4.5□□□□□ -1.69
LSM5-209ENST00000468872 C10orf88Q9H8K7 445 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 MRPL17Q9NRX2 175 aaKnown RBP4.5□□□□□ -1.69
LSM5-209ENST00000468872 AGTPBP1Q9UPW5 1226 aa4.5□□□□□ -1.69
LSM5-209ENST00000468872 RIMS1Q86UR5 1692 aaKnown RBP4.49□□□□□ -1.69
LSM5-209ENST00000468872 MTMR11A4FU01 709 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 E5RGE8 158 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 EXTL3O43909 919 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 RTN2O75298 545 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 CRCPO75575 148 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 BAG2O95816 211 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 EML2O95834 649 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 PATE4P0C8F1 98 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 VCLP18206 1134 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 MAP2K2P36507 400 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 RGS19P49795 217 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 AKAP17AQ02040 695 aaKnown RBP4.49□□□□□ -1.69
LSM5-209ENST00000468872 TRIM29Q14134 588 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 PM20D1Q6GTS8 502 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 ZNF790Q6PG37 636 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 KLHDC8AQ8IYD2 350 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 TDHQ8IZJ6 230 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 PRSS35Q8N3Z0 413 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 SFRP1Q8N474 314 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 GBP7Q8N8V2 638 aaPredicted RBP4.49□□□□□ -1.69
LSM5-209ENST00000468872 OR4C15Q8NGM1 316 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 MGARPQ8TDB4 240 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 APOBEC4Q8WW27 367 aaKnown RBP4.49□□□□□ -1.69
LSM5-209ENST00000468872 BCL2L2Q92843 193 aaPredicted RBP4.49□□□□□ -1.69
LSM5-209ENST00000468872 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 PGLYRP2Q96PD5 576 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 RASL10BQ96S79 203 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 ZNF559Q9BR84 538 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 C5orf66Q9H5L9 145 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 EGLN3Q9H6Z9 239 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 RNPEPL1Q9HAU8 725 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 MID1IP1Q9NPA3 183 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 PPANQ9NQ55 473 aaKnown RBP4.49□□□□□ -1.69
LSM5-209ENST00000468872 PNPLA3Q9NST1 481 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 IL36AQ9UHA7 158 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 NSG2Q9Y328 171 aa4.49□□□□□ -1.69
LSM5-209ENST00000468872 CEP170Q5SW79 1584 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 PFASO15067 1338 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 SMCHD1A6NHR9 2005 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 C13orf42A0A1B0GVH6 325 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 ANTXRLA6NF34 631 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 ANKDD1BA6NHY2 528 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 FAM72CH0Y354 149 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 PCDH7O60245 1069 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 ATP9AO75110 1047 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 RAD51DO75771 328 aa4.48□□□□□ -1.69
LSM5-209ENST00000468872 CDC123O75794 336 aaPredicted RBP4.48□□□□□ -1.69
LSM5-209ENST00000468872 AKAP3O75969 853 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms