RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 LSMEM2Q8N112 164 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 ANKRD53Q8N9V6 530 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 CAMKVQ8NCB2 501 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 METTL6Q8TCB7 284 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 LRRC8CQ8TDW0 803 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 SLC13A3Q8WWT9 602 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 TEFMQ96QE5 360 aaKnown RBP14.53□□□□□ -0.08
SNIP1-202ENST00000468040 FRG2BQ96QU4 278 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 TAAR9Q96RI9 348 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 ASPSCR1Q9BZE9 553 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 B3GNT4Q9C0J1 378 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 NRSN2Q9GZP1 204 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 ELOVL6Q9H5J4 265 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 POLR1BQ9H9Y6 1135 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 PRM3Q9NNZ6 103 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 THAP1Q9NVV9 213 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 SPEGQ15772 3267 aa14.53□□□□□ -0.08
SNIP1-202ENST00000468040 NDUFS4O43181 175 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 CHEK2O96017 543 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 EIF2S1P05198 315 aaKnown RBP14.52□□□□□ -0.09
SNIP1-202ENST00000468040 FGF4P08620 206 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 MAPK10P53779 464 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 EMP3P54852 163 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 CYP4F2P78329 520 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 GABREP78334 506 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 ZNF33BQ06732 778 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.52□□□□□ -0.09
SNIP1-202ENST00000468040 WASHC2DQ5SRD0 308 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 YOD1Q5VVQ6 348 aaPredicted RBP14.52□□□□□ -0.09
SNIP1-202ENST00000468040 CES4AQ5XG92 561 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 TTC29Q8NA56 475 aaPredicted RBP14.52□□□□□ -0.09
SNIP1-202ENST00000468040 OR1L3Q8NH93 324 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 NT5CQ8TCD5 201 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 CKAP2Q8WWK9 683 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 ZNF75CPQ92670 426 aaPredicted RBP14.52□□□□□ -0.09
SNIP1-202ENST00000468040 TM4SF19Q96DZ7 209 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 MAGEB18Q96M61 343 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 SHCBP1LQ9BZQ2 653 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 ILKAPQ9H0C8 392 aaPredicted RBP14.52□□□□□ -0.09
SNIP1-202ENST00000468040 SYNPO2LQ9H987 977 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.52□□□□□ -0.09
SNIP1-202ENST00000468040 PCDHGA3Q9Y5H0 932 aa14.52□□□□□ -0.09
SNIP1-202ENST00000468040 A0A1W2PNU3 283 aaPredicted RBP14.51□□□□□ -0.09
SNIP1-202ENST00000468040 FITM1A5D6W6 292 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 URADA6NGE7 173 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 H3BMH7 237 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 FOXE1O00358 373 aaPredicted RBP14.51□□□□□ -0.09
SNIP1-202ENST00000468040 FFAR3O14843 346 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 AZIN1O14977 448 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 GPR42O15529 346 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 ITM2AO43736 263 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 SNNO75324 88 aaPredicted RBP14.51□□□□□ -0.09
SNIP1-202ENST00000468040 ULK1O75385 1050 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 TNFSF15O95150 251 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 SERPIND1P05546 499 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 SERPINA6P08185 405 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 UROSP10746 265 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 ARRB2P32121 409 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 ETV5P41161 510 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 PRTGQ2VWP7 1150 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 FAM214AQ32MH5 1076 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 SH2D4BQ5SQS7 431 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 GARNL3Q5VVW2 1013 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 MARCH9Q86YJ5 346 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 TMEM126BQ8IUX1 230 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 CLYBLQ8N0X4 340 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 AFAP1L2Q8N4X5 818 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 HUS1BQ8NHY5 278 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 WDR20Q8TBZ3 569 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 CREB3L4Q8TEY5 395 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 ZNF473Q8WTR7 871 aaKnown RBP14.51□□□□□ -0.09
SNIP1-202ENST00000468040 SELENOMQ8WWX9 145 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 CCT6BQ92526 530 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 CTRCQ99895 268 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 NDC1Q9BTX1 674 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 APMAPQ9HDC9 416 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 PSD3Q9NYI0 1048 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 PPT2Q9UMR5 302 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 SRPK3Q9UPE1 567 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 RAP2CQ9Y3L5 183 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 TRAF6Q9Y4K3 522 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 NEUROG3Q9Y4Z2 214 aa14.51□□□□□ -0.09
SNIP1-202ENST00000468040 HYKKA2RU49 373 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 MANBAO00462 879 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 P2RX6O15547 441 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 LYPLA1O75608 230 aaPredicted RBP14.5□□□□□ -0.09
SNIP1-202ENST00000468040 SCRG1O75711 98 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 HBQ1P09105 142 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 RBMS1P29558 406 aaKnown RBP14.5□□□□□ -0.09
SNIP1-202ENST00000468040 ARSFP54793 590 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 STXBP1P61764 594 aaKnown RBP14.5□□□□□ -0.09
SNIP1-202ENST00000468040 DDX39BQ13838 428 aaKnown RBP14.5□□□□□ -0.09
SNIP1-202ENST00000468040 NDUFA9Q16795 377 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 HKDC1Q2TB90 917 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 KANK2Q63ZY3 851 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 ADNP2Q6IQ32 1131 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 PWWP2BQ6NUJ5 590 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 IGF2-ASQ6U949 168 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 RGS9BPQ6ZS82 235 aa14.5□□□□□ -0.09
SNIP1-202ENST00000468040 VN1R5Q7Z5H4 357 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms