RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 CBX5P45973 191 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 ZFP36L2P47974 494 aaKnown RBP17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 MRPL19P49406 292 aaKnown RBP17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 POLR2JP52435 117 aaKnown RBP17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 RHOAP61586 193 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 CSNK2BP67870 215 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 SMAD3P84022 425 aaKnown RBP17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 SMARCB1Q12824 385 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 SIM2Q14190 667 aaPredicted RBP17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 TRIM60Q495X7 471 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 ENPP6Q6UWR7 440 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 Q6ZSR9 355 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 AHSA2Q719I0 299 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 LURAP1LQ8IV03 231 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 OR4M2Q8NGB6 313 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 MAGEB10Q96LZ2 347 aaPredicted RBP17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 ADGRE3Q9BY15 652 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 RIBC2Q9H4K1 309 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 ERVMER34-1Q9H9K5 563 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 AASSQ9UDR5 926 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 LIMD1Q9UGP4 676 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 FRMPD3Q5JV73 1810 aa17.46■□□□□ 0.38
SNAPC3-205ENST00000467062 THSD7BQ9C0I4 1608 aa17.46■□□□□ 0.38
SNAPC3-205ENST00000467062 M0R082 166 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 NDUFA2O43678 99 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 TTPAP49638 278 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 SCN1BQ07699 218 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 GBX1Q14549 363 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 GARNL3Q5VVW2 1013 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 SHEQ5VZ18 495 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 TXNDC8Q6A555 127 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 SLC8B1Q6J4K2 584 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 RDH10Q8IZV5 341 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 NKAPQ8N5F7 415 aaKnown RBP17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 CARS2Q9HA77 564 aaKnown RBP17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 GRXCR2A6NFK2 248 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 HOXB8P17481 243 aaPredicted RBP17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 WEE1P30291 646 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 TNFSF8P32971 234 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 SNRPD2P62316 118 aaKnown RBP17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 RHAGQ02094 409 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 MAD2L1BPQ15013 274 aaPredicted RBP17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 GPRIN3Q6ZVF9 776 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 KIF18BQ86Y91 864 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 APCDD1Q8J025 514 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 FAM86B1Q8N7N1 296 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 LKAAEAR1Q8TD35 194 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 DACT3Q96B18 629 aaPredicted RBP17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 Q96MT0 163 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 CCDC115Q96NT0 180 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 SIGLEC11Q96RL6 698 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 HDHD5Q9BXW7 423 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 CIPCQ9C0C6 399 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 ELAC1Q9H777 363 aaKnown RBP17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 C3orf14Q9HBI5 128 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 CLEC4EQ9ULY5 219 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 HSPB11Q9Y547 144 aa17.45■□□□□ 0.38
SNAPC3-205ENST00000467062 A0A075B6Q4 140 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 TOR1AO14656 332 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 POU3F3P20264 500 aaPredicted RBP17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 CSKP41240 450 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 DGKQP52824 942 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 PPP1R8Q12972 351 aaKnown RBP17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 GALEQ14376 348 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 SMN1Q16637 294 aaKnown RBP17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 C6orf136Q5SQH8 315 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 CLVS2Q5SYC1 327 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 SPOUT1Q5T280 376 aaKnown RBP17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 TMEM65Q6PI78 240 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 IL27RAQ6UWB1 636 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 GALNT5Q7Z7M9 940 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 TMEM179BQ7Z7N9 219 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 CRIPAKQ8N1N5 446 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 ARL14EPQ8N8R7 260 aaPredicted RBP17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 METTL6Q8TCB7 284 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 APOL5Q9BWW9 433 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 NSUN3Q9H649 340 aaKnown RBP17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 ASAH2Q9NR71 780 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 PKP3Q9Y446 797 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 SOX9P48436 509 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 ELAVL2Q12926 359 aaKnown RBP17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 ZNF267Q14586 743 aaPredicted RBP17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 NCEH1Q6PIU2 408 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 ARSKQ6UWY0 536 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 ASB15Q8WXK1 588 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 PPM1MQ96MI6 270 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 ZNF578Q96N58 590 aaPredicted RBP17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 TNKS2Q9H2K2 1166 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 RNF121Q9H920 327 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 HMX1Q9NP08 348 aaPredicted RBP17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 AIG1Q9NVV5 245 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 ING3Q9NXR8 418 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 LHX3Q9UBR4 397 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 ADGRE2Q9UHX3 823 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 RIMKLBQ9ULI2 386 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 PRSS21Q9Y6M0 314 aa17.44■□□□□ 0.38
SNAPC3-205ENST00000467062 FFAR3O14843 346 aa17.43■□□□□ 0.38
SNAPC3-205ENST00000467062 GPR42O15529 346 aa17.43■□□□□ 0.38
SNAPC3-205ENST00000467062 MITFO75030 526 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms