RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 TTC29Q8NA56 475 aaPredicted RBP15.27■□□□□ 0.04
GPC1-207ENST00000466624 RAB3IL1Q8TBN0 382 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 NT5CQ8TCD5 201 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 AGAP11Q8TF27 550 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 SLC13A3Q8WWT9 602 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 PMEPA1Q969W9 287 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 MOCOSQ96EN8 888 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 ZNF578Q96N58 590 aaPredicted RBP15.27■□□□□ 0.04
GPC1-207ENST00000466624 LRFN5Q96NI6 719 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 SPRY4Q9C004 299 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 SPRTNQ9H040 489 aaPredicted RBP15.27■□□□□ 0.04
GPC1-207ENST00000466624 THSD1Q9NS62 852 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 DKK4Q9UBT3 224 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 ZNF225Q9UK10 706 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 RNF11Q9Y3C5 154 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 TMEM184BQ9Y519 407 aaPredicted RBP15.27■□□□□ 0.04
GPC1-207ENST00000466624 AK5Q9Y6K8 562 aa15.27■□□□□ 0.04
GPC1-207ENST00000466624 MED19A0JLT2 244 aaPredicted RBP15.26■□□□□ 0.03
GPC1-207ENST00000466624 ANKDD1BA6NHY2 528 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 TMEM114B3SHH9 223 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.26■□□□□ 0.03
GPC1-207ENST00000466624 BRINP1O60477 761 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 CPNE3O75131 537 aaKnown RBP15.26■□□□□ 0.03
GPC1-207ENST00000466624 CLEC3AO75596 197 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 TIAF1O95411 115 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 SERPINE1P05121 402 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 CTSBP07858 339 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 SERPINA6P08185 405 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 TSPAN8P19075 237 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 GRK2P25098 689 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 SLC5A2P31639 672 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 ARL1P40616 181 aaPredicted RBP15.26■□□□□ 0.03
GPC1-207ENST00000466624 PIK3CBP42338 1070 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 ZNF33BQ06732 778 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 MAP7Q14244 749 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 RCN2Q14257 317 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 RHBDD2Q6NTF9 364 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 LETMD1Q6P1Q0 360 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 SYVN1Q86TM6 617 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 MYLK4Q86YV6 388 aaPredicted RBP15.26■□□□□ 0.03
GPC1-207ENST00000466624 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.26■□□□□ 0.03
GPC1-207ENST00000466624 ARHGEF39Q8N4T4 335 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 OR7G3Q8NG95 312 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 WDR20Q8TBZ3 569 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 CREB3L4Q8TEY5 395 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 CDK15Q96Q40 435 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 SLC29A3Q9BZD2 475 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 EML4Q9HC35 981 aaKnown RBP15.26■□□□□ 0.03
GPC1-207ENST00000466624 MID1IP1Q9NPA3 183 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 ACSS2Q9NR19 701 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 IRAK4Q9NWZ3 460 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 PSD3Q9NYI0 1048 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 FOXJ2Q9P0K8 574 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 PPT2Q9UMR5 302 aa15.26■□□□□ 0.03
GPC1-207ENST00000466624 FER1L5A0AVI2 2057 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 A0A1B0GTL3 188 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 URADA6NGE7 173 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 UBFD1O14562 309 aaKnown RBP15.25■□□□□ 0.03
GPC1-207ENST00000466624 P2RX6O15547 441 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 NDUFS4O43181 175 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 ZNF749O43361 778 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 OR4F21O95013 312 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 DLGAP3O95886 979 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 EIF2S1P05198 315 aaKnown RBP15.25■□□□□ 0.03
GPC1-207ENST00000466624 NR1D1P20393 614 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 PHEXP78562 749 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 RGS1Q08116 209 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 ZRSR2Q15696 482 aaKnown RBP15.25■□□□□ 0.03
GPC1-207ENST00000466624 CHI3L2Q15782 390 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 CPSF6Q16630 551 aaKnown RBP eCLIP15.25■□□□□ 0.03
GPC1-207ENST00000466624 MUM1Q2TAK8 710 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 HKDC1Q2TB90 917 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 TBC1D25Q3MII6 688 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 ZCCHC23Q6ZST2 131 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 TRIM42Q8IWZ5 723 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 PPP1R14CQ8TAE6 165 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 PROKR1Q8TCW9 393 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 MGARPQ8TDB4 240 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 ZNF473Q8WTR7 871 aaKnown RBP15.25■□□□□ 0.03
GPC1-207ENST00000466624 GATA6Q92908 595 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 PAIP2Q9BPZ3 127 aaKnown RBP15.25■□□□□ 0.03
GPC1-207ENST00000466624 NDC1Q9BTX1 674 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 ULBP3Q9BZM4 244 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 SLC6A16Q9GZN6 736 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 ACTR5Q9H9F9 607 aaPredicted RBP15.25■□□□□ 0.03
GPC1-207ENST00000466624 MLXIPLQ9NP71 852 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 SNX6Q9UNH7 406 aa15.25■□□□□ 0.03
GPC1-207ENST00000466624 RUVBL1Q9Y265 456 aaKnown RBP15.25■□□□□ 0.03
GPC1-207ENST00000466624 SEC16AO15027 2179 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 HYKKA2RU49 373 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 WDR91A4D1P6 747 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 FOXE1O00358 373 aaPredicted RBP15.24■□□□□ 0.03
GPC1-207ENST00000466624 STK17BO94768 372 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 KIAA0754O94854 1291 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 HYAL2Q12891 473 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 FAM53BQ14153 422 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 NDUFA9Q16795 377 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 ADPRMQ3LIE5 342 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 ARL13AQ5H913 290 aaPredicted RBP15.24■□□□□ 0.03
GPC1-207ENST00000466624 FRG2Q64ET8 278 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms