RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 ZHX1-C8orf76Q96EF9 292 aa12.32□□□□□ -0.44
ARHGEF3-204ENST00000465659 TPD52L3Q96J77 140 aa12.32□□□□□ -0.44
ARHGEF3-204ENST00000465659 MTERF1Q99551 399 aaKnown RBP12.32□□□□□ -0.44
ARHGEF3-204ENST00000465659 MMP27Q9H306 513 aa12.32□□□□□ -0.44
ARHGEF3-204ENST00000465659 WDR37Q9Y2I8 494 aa12.32□□□□□ -0.44
ARHGEF3-204ENST00000465659 KRT87PA6NCN2 255 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 ARHGEF33A8MVX0 844 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 E7EQ34 232 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 GCM2O75603 506 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 RFPL2O75678 378 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 ZNF30P17039 623 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 IDSP22304 550 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 SELENOWP63302 87 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 TUBA3EQ6PEY2 450 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 DPY19L3Q6ZPD9 716 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 P3H2Q8IVL5 708 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 C11orf65Q8NCR3 313 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 GOT1L1Q8NHS2 421 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 MYDGFQ969H8 173 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 COPS4Q9BT78 406 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 BBS2Q9BXC9 721 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 LYVE1Q9Y5Y7 322 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 A8MVJ9 347 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 UPK3BL1B0FP48 263 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 UPK3BL2E5RIL1 263 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 RNASET2O00584 256 aaKnown RBP12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 ADAMDEC1O15204 470 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 HOXD10P28358 340 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 RRM2P31350 389 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 EIF2DP41214 584 aaKnown RBP12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 POLR2LP62875 67 aaKnown RBP12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 CDC20Q12834 499 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 SPIN4Q56A73 249 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 GAREM2Q75VX8 874 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 PAGE2Q7Z2X7 111 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 SLC39A11Q8N1S5 342 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 DNAJC22Q8N4W6 341 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 RAD9AQ99638 391 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 ZDHHC6Q9H6R6 413 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 NDUFAF4Q9P032 175 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 ZNF282Q9UDV7 671 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 VPS4AQ9UN37 437 aa12.31□□□□□ -0.44
ARHGEF3-204ENST00000465659 ISPDA4D126 451 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 TAF4O00268 1085 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 AQP9O43315 295 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 CNOT3O75175 753 aaKnown RBP12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 CKMP06732 381 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 ANXA4P09525 319 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 HLA-FP30511 346 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 LIPAP38571 399 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 CYP4F8P98187 520 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 GAB1Q13480 694 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 AGTRAPQ6RW13 159 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 NCCRP1Q6ZVX7 275 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 SNX29P2Q8IUI4 249 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 C1orf52Q8N6N3 182 aaKnown RBP12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 OR4C15Q8NGM1 316 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 MCFD2Q8NI22 146 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 MRPS31Q92665 395 aaKnown RBP12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 TIFAQ96CG3 184 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 OR4K3Q96R72 315 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 DCSTAMPQ9H295 470 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 RUBCNLQ9H714 662 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 STOX2Q9P2F5 926 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 NFKBIL1Q9UBC1 381 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 CLCA1A8K7I4 914 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 WASH3PC4AMC7 463 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 M0R082 166 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 QSOX1O00391 747 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 ETHE1O95571 254 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 CDK1P06493 297 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 ANXA8P13928 327 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 GABRR2P28476 465 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 MVDP53602 400 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 INAVAQ3KP66 663 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 CATSPEREQ5SY80 951 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 GPR153Q6NV75 609 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 NAGSQ8N159 534 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 OR56A3Q8NH54 315 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 FEVQ99581 238 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 BHLHE41Q9C0J9 482 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 NXF2Q9GZY0 626 aaKnown RBP12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 FAM83DQ9H4H8 585 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 SGK2Q9HBY8 427 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 ATP6V1HQ9UI12 483 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 CD84Q9UIB8 345 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 UGT2A1Q9Y4X1 527 aa12.3□□□□□ -0.44
ARHGEF3-204ENST00000465659 METTL15A6NJ78 407 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 SAGE2PA6NJ88 616 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 TNFRSF11BO00300 401 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 GRM6O15303 877 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 AIREO43918 545 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 MTX2O75431 263 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 TNFRSF21O75509 655 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 TIA1P31483 386 aaKnown RBP eCLIP12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 CTSKP43235 329 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 PPIGQ13427 754 aaKnown RBP eCLIP12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 ZNF404Q494X3 552 aa12.29□□□□□ -0.44
ARHGEF3-204ENST00000465659 FBXO43Q4G163 708 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms