RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 ROPN1BQ9BZX4 212 aaPredicted RBP11.79□□□□□ -0.52
CHPF2-202ENST00000465601 ACTL8Q9H568 366 aa11.79□□□□□ -0.52
CHPF2-202ENST00000465601 ROPN1Q9HAT0 212 aaPredicted RBP11.79□□□□□ -0.52
CHPF2-202ENST00000465601 IFT80Q9P2H3 777 aaPredicted RBP11.79□□□□□ -0.52
CHPF2-202ENST00000465601 DCDC2Q9UHG0 476 aa11.79□□□□□ -0.52
CHPF2-202ENST00000465601 GPN3Q9UHW5 284 aaPredicted RBP11.79□□□□□ -0.52
CHPF2-202ENST00000465601 MRPS2Q9Y399 296 aaKnown RBP11.79□□□□□ -0.52
CHPF2-202ENST00000465601 ANGPTL3Q9Y5C1 460 aa11.79□□□□□ -0.52
CHPF2-202ENST00000465601 PCDHGA6Q9Y5G7 932 aa11.79□□□□□ -0.52
CHPF2-202ENST00000465601 SPTA1P02549 2419 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 ZNF891A8MT65 544 aaPredicted RBP11.78□□□□□ -0.52
CHPF2-202ENST00000465601 FOXS1O43638 330 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 CREG1O75629 220 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 GSTA1P08263 222 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 PRKAR1AP10644 381 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 EPB42P16452 691 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 CXCR2P25025 360 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 EEF1DP29692 281 aaKnown RBP11.78□□□□□ -0.52
CHPF2-202ENST00000465601 AHRP35869 848 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 FOXL2P58012 376 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 IRF8Q02556 426 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 ERV3-1Q14264 604 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 NCF4Q15080 339 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 PCBP2Q15366 365 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHPF2-202ENST00000465601 NDUFA9Q16795 377 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 ATP1A1-AS1Q5TC04 95 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 GARNL3Q5VVW2 1013 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 TMIGD1Q6UXZ0 262 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 COX15Q7KZN9 410 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 LCA5Q86VQ0 697 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 KRT78Q8N1N4 520 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 ZCCHC10Q8TBK6 192 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 SNRNP27Q8WVK2 155 aaKnown RBP11.78□□□□□ -0.52
CHPF2-202ENST00000465601 COL26A1Q96A83 441 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 PTCD3Q96EY7 689 aaKnown RBP11.78□□□□□ -0.52
CHPF2-202ENST00000465601 EHD1Q9H4M9 534 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 ZNF304Q9HCX3 659 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 ZFP69BQ9UJL9 534 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 TMCO1Q9UM00 188 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 LHX6Q9UPM6 363 aa11.78□□□□□ -0.52
CHPF2-202ENST00000465601 TNPO3Q9Y5L0 923 aaKnown RBP11.78□□□□□ -0.52
CHPF2-202ENST00000465601 TLN1Q9Y490 2541 aaKnown RBP11.78□□□□□ -0.52
CHPF2-202ENST00000465601 A0A0A6YYC8 382 aaPredicted RBP11.77□□□□□ -0.53
CHPF2-202ENST00000465601 STX16-NPEPL1H3BU86 382 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 I3L1I5 382 aaPredicted RBP11.77□□□□□ -0.53
CHPF2-202ENST00000465601 STX16O14662 325 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 NDUFS4O43181 175 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 CNOT3O75175 753 aaKnown RBP11.77□□□□□ -0.53
CHPF2-202ENST00000465601 WFS1O76024 890 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 ONECUT2O95948 504 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 FURINP09958 794 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 SLC35G6P0C7Q6 338 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 PIM1P11309 404 aaPredicted RBP11.77□□□□□ -0.53
CHPF2-202ENST00000465601 KRT4P19013 534 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 CD22P20273 847 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 HNF4AP41235 474 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 MC1RQ01726 317 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 PWP1Q13610 501 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 GTF2H2Q13888 395 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 TBCCQ15814 346 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 TMEM214Q6NUQ4 689 aaKnown RBP11.77□□□□□ -0.53
CHPF2-202ENST00000465601 GTF2H2CQ6P1K8 395 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 MRPL14Q6P1L8 145 aaKnown RBP11.77□□□□□ -0.53
CHPF2-202ENST00000465601 PRMT9Q6P2P2 845 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 OVCH1Q7RTY7 1134 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 PRSS41Q7RTY9 318 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 GOLGA7Q7Z5G4 137 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 TMEM151BQ8IW70 566 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.77□□□□□ -0.53
CHPF2-202ENST00000465601 C4orf33Q8N1A6 199 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 RIBC1Q8N443 379 aaPredicted RBP11.77□□□□□ -0.53
CHPF2-202ENST00000465601 CREB3L4Q8TEY5 395 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 ZBTB9Q96C00 473 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 WDR34Q96EX3 536 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 MMABQ96EY8 250 aaPredicted RBP11.77□□□□□ -0.53
CHPF2-202ENST00000465601 C17orf62Q9BQA9 187 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 TMEM109Q9BVC6 243 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 YIPF2Q9BWQ6 316 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 DRC3Q9H069 523 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 NT5DC2Q9H857 520 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 LGALS13Q9UHV8 139 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 TCFL5Q9UL49 500 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 ZNF490Q9ULM2 529 aaPredicted RBP11.77□□□□□ -0.53
CHPF2-202ENST00000465601 CDC14AQ9UNH5 594 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 PTRH2Q9Y3E5 179 aaKnown RBP11.77□□□□□ -0.53
CHPF2-202ENST00000465601 DOCK10Q96BY6 2186 aa11.77□□□□□ -0.53
CHPF2-202ENST00000465601 CDC14CA4D256 554 aa11.76□□□□□ -0.53
CHPF2-202ENST00000465601 A8MT66 165 aa11.76□□□□□ -0.53
CHPF2-202ENST00000465601 E2F3O00716 465 aa11.76□□□□□ -0.53
CHPF2-202ENST00000465601 COPEO14579 308 aa11.76□□□□□ -0.53
CHPF2-202ENST00000465601 FFAR3O14843 346 aa11.76□□□□□ -0.53
CHPF2-202ENST00000465601 GPR42O15529 346 aa11.76□□□□□ -0.53
CHPF2-202ENST00000465601 DLX3O60479 287 aa11.76□□□□□ -0.53
CHPF2-202ENST00000465601 GLRA3O75311 464 aa11.76□□□□□ -0.53
CHPF2-202ENST00000465601 KLF7O75840 302 aaPredicted RBP11.76□□□□□ -0.53
CHPF2-202ENST00000465601 IL1RNP18510 177 aa11.76□□□□□ -0.53
CHPF2-202ENST00000465601 TAC1P20366 129 aa11.76□□□□□ -0.53
CHPF2-202ENST00000465601 FBLP22087 321 aaKnown RBP11.76□□□□□ -0.53
CHPF2-202ENST00000465601 CRHR1P34998 444 aa11.76□□□□□ -0.53
CHPF2-202ENST00000465601 CASP2P42575 452 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms