RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 FZD6O60353 706 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 ACSL4O60488 711 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 CLDN11O75508 207 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 GPX5O75715 221 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 SLC25A14O95258 325 aaPredicted RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 MYCP01106 439 aaPredicted RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 ALPPP05187 535 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 IL7P13232 177 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 ITGALP20701 1170 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 MZF1P28698 734 aaPredicted RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 SLC6A4P31645 630 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 CRYBA2P53672 197 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 RHAGQ02094 409 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TEAD4Q15561 434 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 SSX1Q16384 188 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 CPSF6Q16630 551 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP48-206ENST00000464577 UGT8Q16880 541 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 MICAQ29983 383 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 GPAT3Q53EU6 434 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 NOXRED1Q6NXP6 359 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TMPRSS11AQ6ZMR5 421 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 CHST9Q7L1S5 443 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 ZNF438Q7Z4V0 828 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TRIM69Q86WT6 500 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 RASAL3Q86YV0 1011 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 RAVER1Q8IY67 606 aaKnown RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 RDH10Q8IZV5 341 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 CFAP52Q8N1V2 620 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 C1orf52Q8N6N3 182 aaKnown RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 B3GNT7Q8NFL0 401 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 JPH3Q8WXH2 748 aaPredicted RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 MTFMTQ96DP5 389 aaKnown RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 APIPQ96GX9 242 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TPD52L3Q96J77 140 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 MAPKAP1Q9BPZ7 522 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 DPH2Q9BQC3 489 aaPredicted RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 CCM2Q9BSQ5 444 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TMEM245Q9H330 911 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 AMBNQ9NP70 447 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 IMPAD1Q9NX62 359 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 MS4A12Q9NXJ0 267 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 PAQR5Q9NXK6 330 aaPredicted RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 NDUFAF4Q9P032 175 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 SNX7Q9UNH6 387 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 ARRDC5A6NEK1 342 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TMEM189-UBE2V1I3L0A0 370 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 EIF3FO00303 357 aaPredicted RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 TRIM3O75382 744 aaPredicted RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 LRATO95237 230 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 PRAMEF1O95521 474 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 C1QCP02747 245 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 RPLP2P05387 115 aaKnown RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 SCG5P05408 212 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 RHOCP08134 193 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 ZDHHC11BP0C7U3 371 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 HSMCR30P0CW71 290 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 CHMP24386 653 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 GRK4P32298 578 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 IDH2P48735 452 aaKnown RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 RORCP51449 518 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 CRISP3P54108 245 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 CDC42P60953 191 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 PSPHP78330 225 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 PURAQ00577 322 aaKnown RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 BEX3Q00994 111 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 SCN1BQ07699 218 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 HYAL2Q12891 473 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TAF10Q12962 218 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 ZNF79Q15937 498 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 SNAP47Q5SQN1 464 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 PRAMEF19Q5SWL8 479 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 LDLRAD1Q5T700 205 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 PLAG1Q6DJT9 500 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 SIGIRRQ6IA17 410 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 SYCE2Q6PIF2 218 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 XKRXQ6PP77 449 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 ZNF621Q6ZSS3 439 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 SYT12Q8IV01 421 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 SLC44A2Q8IWA5 706 aaPredicted RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 PEX5LQ8IYB4 626 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TCTE3Q8IZS6 198 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 LGI4Q8N135 537 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 CACTIN-AS1Q8N1I8 211 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 C11orf65Q8NCR3 313 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 EGLN2Q96KS0 407 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 APOLD1Q96LR9 279 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 DMRTB1Q96MA1 342 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 OPALINQ96PE5 141 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 OR5M11Q96RB7 305 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TTYH2Q9BSA4 534 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TSEN34Q9BSV6 310 aaKnown RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 TRAF4Q9BUZ4 470 aaPredicted RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 BOCQ9BWV1 1114 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 ASPNQ9BXN1 380 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 GPR63Q9BZJ6 419 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TPT1P8Q9HAU6 139 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 DIABLOQ9NR28 239 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 THSD1Q9NS62 852 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 KCTD5Q9NXV2 234 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 SEC14L4Q9UDX3 406 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms