RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 C17orf62Q9BQA9 187 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 AICDAQ9GZX7 198 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 EHD1Q9H4M9 534 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 ZNF304Q9HCX3 659 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 PSMC3IPQ9P2W1 217 aaPredicted RBP16.82■□□□□ 0.28
VPS52-214ENST00000463486 CTSFQ9UBX1 484 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 ZFP69BQ9UJL9 534 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 ZNF490Q9ULM2 529 aaPredicted RBP16.82■□□□□ 0.28
VPS52-214ENST00000463486 MAU2Q9Y6X3 613 aa16.82■□□□□ 0.28
VPS52-214ENST00000463486 LRRC14BA6NHZ5 514 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 SYCE1LA8MT33 242 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 FOXO6A8MYZ6 492 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 SUPT3HB4E1H0 165 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 ATXN7O15265 892 aaPredicted RBP16.81■□□□□ 0.28
VPS52-214ENST00000463486 SUPT3HO75486 399 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 WFS1O76024 890 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 GRK3P35626 688 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 AHRP35869 848 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 CASP2P42575 452 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 PWP1Q13610 501 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 DSG2Q14126 1118 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 NAA30Q147X3 362 aaPredicted RBP16.81■□□□□ 0.28
VPS52-214ENST00000463486 SETDB1Q15047 1291 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 RASA2Q15283 850 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 PDK4Q16654 411 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 DEFB109BQ30KR1 87 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 LRRC70Q7Z2Q7 622 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 PDSS2Q86YH6 399 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 CAMKVQ8NCB2 501 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 NT5CQ8TCD5 201 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 CATSPER2Q96P56 530 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 CAPS2Q9BXY5 557 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 PARD6BQ9BYG5 372 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 NT5DC2Q9H857 520 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 WDR54Q9H977 334 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 KCNMB2Q9Y691 235 aa16.81■□□□□ 0.28
VPS52-214ENST00000463486 A0A0A6YYC8 382 aaPredicted RBP16.8■□□□□ 0.28
VPS52-214ENST00000463486 CDC14CA4D256 554 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 I3L1I5 382 aaPredicted RBP16.8■□□□□ 0.28
VPS52-214ENST00000463486 K7EPI3 171 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 RBP1P09455 135 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 ALDH18A1P54886 795 aaKnown RBP16.8■□□□□ 0.28
VPS52-214ENST00000463486 DOC2AQ14183 400 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 PCBP2Q15366 365 aaKnown RBP eCLIP16.8■□□□□ 0.28
VPS52-214ENST00000463486 TBCCQ15814 346 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 PFKFB4Q16877 469 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 KLC3Q6P597 504 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 EMBQ6PCB8 327 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 BORAQ6PGQ7 559 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 VN1R5Q7Z5H4 357 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 LSM14AQ8ND56 463 aaKnown RBP16.8■□□□□ 0.28
VPS52-214ENST00000463486 CAVIN3Q969G5 261 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 AIF1LQ9BQI0 150 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 DRC3Q9H069 523 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 TBK1Q9UHD2 729 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 RAB21Q9UL25 225 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 PTRH2Q9Y3E5 179 aaKnown RBP16.8■□□□□ 0.28
VPS52-214ENST00000463486 SLC22A7Q9Y694 548 aa16.8■□□□□ 0.28
VPS52-214ENST00000463486 SPTA1P02549 2419 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 IQANK1A0A1B0GTG1 560 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 A0A1W2PPM1 405 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 CCNT2O60583 730 aaKnown RBP16.79■□□□□ 0.28
VPS52-214ENST00000463486 S100BP04271 92 aaPredicted RBP16.79■□□□□ 0.28
VPS52-214ENST00000463486 CD63P08962 238 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 NUDT17P0C025 328 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 ATXN8OSP0DMR3 200 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 SMIM10L1P0DMW3 83 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 PIM1P11309 404 aaPredicted RBP16.79■□□□□ 0.28
VPS52-214ENST00000463486 EFNA3P52797 238 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 SLBPQ14493 270 aaKnown RBP eCLIP16.79■□□□□ 0.28
VPS52-214ENST00000463486 SSPNQ14714 243 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 TSNAXIP1Q2TAA8 658 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 ADNP2Q6IQ32 1131 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 OR9A4Q8NGU2 314 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 ACMSDQ8TDX5 336 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 SMIM10Q96HG1 83 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 MRPL57Q9BQC6 102 aaKnown RBP16.79■□□□□ 0.28
VPS52-214ENST00000463486 CCDC77Q9BR77 488 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 SLC6A16Q9GZN6 736 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 TMEM216Q9P0N5 145 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 XPR1Q9UBH6 696 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 GPN3Q9UHW5 284 aaPredicted RBP16.79■□□□□ 0.28
VPS52-214ENST00000463486 CDC14AQ9UNH5 594 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 POLHQ9Y253 713 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 MED13Q9UHV7 2174 aa16.79■□□□□ 0.28
VPS52-214ENST00000463486 C4orf51C9J302 202 aa16.78■□□□□ 0.28
VPS52-214ENST00000463486 H0YIG0 161 aa16.78■□□□□ 0.28
VPS52-214ENST00000463486 TK2O00142 265 aa16.78■□□□□ 0.28
VPS52-214ENST00000463486 NDUFS4O43181 175 aa16.78■□□□□ 0.28
VPS52-214ENST00000463486 DNAJB6O75190 326 aa16.78■□□□□ 0.28
VPS52-214ENST00000463486 SIX3O95343 332 aaPredicted RBP16.78■□□□□ 0.28
VPS52-214ENST00000463486 NSA2O95478 260 aaKnown RBP16.78■□□□□ 0.28
VPS52-214ENST00000463486 SLCO1A2P46721 670 aa16.78■□□□□ 0.28
VPS52-214ENST00000463486 SYT16Q17RD7 645 aa16.78■□□□□ 0.28
VPS52-214ENST00000463486 VWA2Q5GFL6 755 aa16.78■□□□□ 0.28
VPS52-214ENST00000463486 TMIGD1Q6UXZ0 262 aa16.78■□□□□ 0.28
VPS52-214ENST00000463486 PPP1R32Q7Z5V6 425 aa16.78■□□□□ 0.28
VPS52-214ENST00000463486 LAPTM4BQ86VI4 370 aa16.78■□□□□ 0.28
VPS52-214ENST00000463486 SNX31Q8N9S9 440 aa16.78■□□□□ 0.28
VPS52-214ENST00000463486 OR2W6PQ8NHA6 318 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms