RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	TMEM184C	Q9NVA4	438 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	ANKRD10	Q9NXR5	420 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	HCN3	Q9P1Z3	774 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	TEKT2	Q9UIF3	430 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	ASB1	Q9Y576	335 aa		10.51	□□□□□ -0.73
PTPN7-204	ENST00000462815	CACNA1C	Q13936	2221 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	HRNR	Q86YZ3	2850 aa	Predicted RBP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZNF839	A8K0R7	811 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815		A8MUI8	341 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	SGK494	L7N484	410 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	LCMT2	O60294	686 aa	Known RBP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	DNAJB6	O75190	326 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	CLDN14	O95500	239 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	COIL	P38432	576 aa	Predicted RBP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	AVPR1B	P47901	424 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	RPS15A	P62244	130 aa	Known RBP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	TSTA3	Q13630	321 aa	Predicted RBP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	USP10	Q14694	798 aa	Known RBP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	NDUFA9	Q16795	377 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	MEP1A	Q16819	746 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	MINDY4	Q4G0A6	757 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	KRTCAP3	Q53RY4	240 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	C4orf22	Q6V702	233 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	PIWIL4	Q7Z3Z4	852 aa	Known RBP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	LRRC8A	Q8IWT6	810 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	LGI4	Q8N135	537 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	OTUD6B	Q8N6M0	293 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	KCT2	Q8NC54	265 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	PLPP5	Q8NEB5	264 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	ELP5	Q8TE02	316 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	METTL21A	Q8WXB1	218 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	TSLP	Q969D9	159 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	MTFMT	Q96DP5	389 aa	Known RBP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	EBNA1BP2	Q99848	306 aa	Known RBP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	ENKD1	Q9H0I2	346 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	KLHL1	Q9NR64	748 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	IGSF5	Q9NSI5	407 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	UTP6	Q9NYH9	597 aa	Known RBP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	ADAMTS6	Q9UKP5	1117 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZKSCAN5	Q9Y2L8	839 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	DHRS7	Q9Y394	339 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	MAP1A	P78559	2803 aa	Predicted RBP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	NIPBL	Q6KC79	2804 aa	eCLIP	10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	ITPR3	Q14573	2671 aa		10.5	□□□□□ -0.73
PTPN7-204	ENST00000462815	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	FEZF1	A0PJY2	475 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	GABRR3	A8MPY1	467 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	GOLGA6L6	A8MZA4	724 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815		E5RI56	91 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	NPIPA5	E9PKD4	350 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	TTI1	O43156	1089 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	RDH16	O75452	317 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	UQCRH	P07919	91 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	SP1	P08047	785 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	ENO3	P13929	434 aa	Predicted RBP	10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	IGFBP2	P18065	325 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	HRH2	P25021	359 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	SSTR2	P30874	369 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	SLC1A2	P43004	574 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	MAGEA3	P43357	314 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	AGTR2	P50052	363 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	SLC26A5	P58743	744 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	HSF1	Q00613	529 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	CTBP1	Q13363	440 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	EXT1	Q16394	746 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	SFT2D3	Q587I9	215 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZNF470	Q6ECI4	717 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	PAPD4	Q6PIY7	484 aa	Known RBP	10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	SPNS3	Q6ZMD2	512 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	MBOAT1	Q6ZNC8	495 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	GALNTL5	Q7Z4T8	443 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	ADCK2	Q7Z695	626 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	SLC26A11	Q86WA9	606 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	DOLPP1	Q86YN1	238 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	CPNE9	Q8IYJ1	553 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	ARMC10	Q8N2F6	343 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	KIF2B	Q8N4N8	673 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	OR5T3	Q8NGG3	340 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	PHF10	Q8WUB8	498 aa	Known RBP	10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	THAP11	Q96EK4	314 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	MAGED4	Q96JG8	741 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	GPR21	Q99679	349 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	SPOCK3	Q9BQ16	436 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	UTP23	Q9BRU9	249 aa	Known RBP	10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	SARG	Q9BW04	601 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	SGPP1	Q9BX95	441 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	RBCK1	Q9BYM8	510 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	KCNK13	Q9HB14	408 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	FBXO6	Q9NRD1	293 aa	Predicted RBP	10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	C19orf25	Q9UFG5	118 aa	Predicted RBP	10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	NPIPA1	Q9UND3	350 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	HRH3	Q9Y5N1	445 aa		10.49	□□□□□ -0.73
PTPN7-204	ENST00000462815	FAM237B	A0A1B0GVD1	139 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	CTAGE15	A4D2H0	777 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	MAGEB17	A8MXT2	336 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	FAM227A	F5H4B4	570 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	EIF3F	O00303	357 aa	Predicted RBP	10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	ASNA1	O43681	348 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	NME2P1	O60361	137 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms