RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 B4GAT1O43505 415 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 ZNF432O94892 652 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 HK1P19367 917 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 AGXTP21549 392 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 CASP3P42574 277 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 RABGGTBP53611 331 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 GSTM4Q03013 218 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 GRSF1Q12849 480 aaKnown RBP eCLIP15.33■□□□□ 0.042e-14■■■■■ 48.8
SMC4-204ENST00000462787 SGCGQ13326 291 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 EIF4HQ15056 248 aaKnown RBP15.33■□□□□ 0.04
SMC4-204ENST00000462787 TCEA2Q15560 299 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 ANKRD54Q6NXT1 300 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 JAZF1Q86VZ6 243 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 GALNT13Q8IUC8 556 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 FAM109AQ8N4B1 249 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 NDC1Q9BTX1 674 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 RHBGQ9H310 441 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 NSUN3Q9H649 340 aaKnown RBP15.33■□□□□ 0.04
SMC4-204ENST00000462787 J3KR12 359 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 ITGA3P26006 1051 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 FCGRTP55899 365 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 TAS2R43P59537 309 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 ADAM8P78325 824 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 EMX1Q04741 257 aaPredicted RBP15.33■□□□□ 0.04
SMC4-204ENST00000462787 LINGO4Q6UY18 593 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 ZNF782Q6ZMW2 699 aaPredicted RBP15.33■□□□□ 0.04
SMC4-204ENST00000462787 UBQLNLQ8IYU4 475 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 C1orf52Q8N6N3 182 aaKnown RBP15.33■□□□□ 0.04
SMC4-204ENST00000462787 MZB1Q8WU39 189 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 NLE1Q9NVX2 485 aaPredicted RBP15.33■□□□□ 0.04
SMC4-204ENST00000462787 P2RX2Q9UBL9 471 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 IQCMA0A1B0GVH7 501 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 CBX2Q14781 532 aaPredicted RBP15.33■□□□□ 0.04
SMC4-204ENST00000462787 RAB12Q6IQ22 244 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 DUS1LQ6P1R4 473 aaKnown RBP15.33■□□□□ 0.04
SMC4-204ENST00000462787 LYSMD3Q7Z3D4 306 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 CFAP206Q8IYR0 622 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 DTWD1Q8N5C7 304 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 OR8J1Q8NGP2 316 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 TSEN15Q8WW01 171 aaKnown RBP15.33■□□□□ 0.04
SMC4-204ENST00000462787 KAT2AQ92830 837 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 EFCAB11Q9BUY7 163 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 IGSF5Q9NSI5 407 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 HPF1Q9NWY4 346 aa15.33■□□□□ 0.04
SMC4-204ENST00000462787 SLC35G4P0C7Q5 338 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 CKMT1AP12532 417 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 PRKACAP17612 351 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 CASP9P55211 416 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 SNRPD2P62316 118 aaKnown RBP15.32■□□□□ 0.04
SMC4-204ENST00000462787 PLA2G4EQ3MJ16 856 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 HLA-DQA1Q5Y7H0 255 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 SIAH1Q8IUQ4 282 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 COQ8AQ8NI60 647 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 SNX18Q96RF0 628 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 TNKS2Q9H2K2 1166 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 MRPL17Q9NRX2 175 aaKnown RBP15.32■□□□□ 0.04
SMC4-204ENST00000462787 FZD1Q9UP38 647 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 SOWAHBA6NEL2 793 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 AXIN1O15169 862 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 MITFO75030 526 aaPredicted RBP15.32■□□□□ 0.04
SMC4-204ENST00000462787 EPCAMP16422 314 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 FDXRP22570 491 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 UQCRC1P31930 480 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 PRKCDQ05655 676 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 RBBP4Q09028 425 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 SMARCD3Q6STE5 483 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 NEIL3Q8TAT5 605 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 CXorf40AQ8TE69 158 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 TMEM174Q8WUU8 243 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 ACOT12Q8WYK0 555 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 NR4A3Q92570 626 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 COMMD4Q9H0A8 199 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 ABCG5Q9H222 651 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 NUDT15Q9NV35 164 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 TIAM2Q8IVF5 1701 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 NALCNQ8IZF0 1738 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 SOX14O95416 240 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 LDOC1O95751 146 aaPredicted RBP15.32■□□□□ 0.04
SMC4-204ENST00000462787 OR4Q2P0C623 313 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 ELFN1P0C7U0 828 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 CHRNB1P11230 501 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 HSDL2Q6YN16 418 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 TREM1Q9NP99 234 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 ZNF214Q9UL59 606 aaPredicted RBP15.32■□□□□ 0.04
SMC4-204ENST00000462787 MEIOCA2RUB1 952 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 CLDN24A6NM45 220 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 ALPPP05187 535 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 ITGAMP11215 1152 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 CRISP1P54107 249 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 ARF5P84085 180 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 PPIGQ13427 754 aaKnown RBP eCLIP15.32■□□□□ 0.042e-7■■■■■ 57.4
SMC4-204ENST00000462787 CAMK1Q14012 370 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 NHSL2Q5HYW2 709 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 RNASE11Q8TAA1 199 aaKnown RBP15.32■□□□□ 0.04
SMC4-204ENST00000462787 PPP1R14AQ96A00 147 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 SMOC2Q9H3U7 446 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 COPZ2Q9P299 210 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 NLKQ9UBE8 527 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 HS3ST4Q9Y661 456 aa15.32■□□□□ 0.04
SMC4-204ENST00000462787 SMIM30A4D0T7 59 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms