RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 CRTC1Q6UUV9 634 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 TFAP2EQ6VUC0 442 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 MACC1Q6ZN28 852 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 ZNF720Q7Z2F6 126 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 ZDHHC13Q8IUH4 622 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 ZNF781Q8N8C0 355 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 OR6S1Q8NH40 331 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 RP9Q8TA86 221 aaKnown RBP5.69□□□□□ -1.5
CLK1-207ENST00000461981 FUBP1Q96AE4 644 aaKnown RBP5.69□□□□□ -1.5
CLK1-207ENST00000461981 FAM131CQ96AQ9 280 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 ZDHHC12Q96GR4 267 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 RPL10LQ96L21 214 aaKnown RBP5.69□□□□□ -1.5
CLK1-207ENST00000461981 SORT1Q99523 831 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 CGRRF1Q99675 332 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 SYT11Q9BT88 431 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 ERVK-6Q9BXR3 956 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 NRSN2Q9GZP1 204 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 RIBC2Q9H4K1 309 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 NMUR1Q9HB89 426 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 TM9SF3Q9HD45 589 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 THUMPD1Q9NXG2 353 aaKnown RBP5.69□□□□□ -1.5
CLK1-207ENST00000461981 ERVK-18Q9QC07 812 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 MIOXQ9UGB7 285 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 LIPT1Q9Y234 373 aa5.69□□□□□ -1.5
CLK1-207ENST00000461981 CKAP5Q14008 2032 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 A0A1W2PP18 115 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 TCRBV7S3A2A0A539 114 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 EFCAB7A8K855 629 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 SCAMP2O15127 329 aaKnown RBP5.68□□□□□ -1.5
CLK1-207ENST00000461981 SLC7A4O43246 635 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 NIPSNAP2O75323 286 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 PRAMEF12O95522 483 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 CXCL8P10145 99 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 FGF3P11487 239 aaPredicted RBP5.68□□□□□ -1.5
CLK1-207ENST00000461981 ATP6V1B2P21281 511 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 HNF4AP41235 474 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 VIPR2P41587 438 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 ELK3P41970 407 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 RFX2P48378 723 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 RAB13P51153 203 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 CCR5P51681 352 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 RIDAP52758 137 aaKnown RBP5.68□□□□□ -1.5
CLK1-207ENST00000461981 RPL6Q02878 288 aaKnown RBP5.68□□□□□ -1.5
CLK1-207ENST00000461981 HSF2Q03933 536 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 ERV3-1Q14264 604 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 SSPNQ14714 243 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 PTPRCAPQ14761 206 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 RTP5Q14D33 572 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 SEC23BQ15437 767 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 SMAD1Q15797 465 aaKnown RBP5.68□□□□□ -1.5
CLK1-207ENST00000461981 ATP6AP1Q15904 470 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 HSD17B12Q53GQ0 312 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 SPANXN2Q5MJ10 180 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 USP30Q70CQ3 517 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 ABI3BPQ7Z7G0 1075 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 IQCHQ86VS3 1027 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 DHFR2Q86XF0 187 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 PACRGLQ8N7B6 248 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 TMC2Q8TDI7 906 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 C2CD4CQ8TF44 421 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 RORBQ92753 470 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 SLC35C1Q96A29 364 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 MOCOSQ96EN8 888 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 QKIQ96PU8 341 aaKnown RBP eCLIP5.68□□□□□ -1.5
CLK1-207ENST00000461981 SLITRK1Q96PX8 696 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 NODALQ96S42 347 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 DCLRE1CQ96SD1 692 aaKnown RBP5.68□□□□□ -1.5
CLK1-207ENST00000461981 SHARPINQ9H0F6 387 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 UCK1Q9HA47 277 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 SGK2Q9HBY8 427 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 TMEM181Q9P2C4 612 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 LSM7Q9UK45 103 aaKnown RBP5.68□□□□□ -1.5
CLK1-207ENST00000461981 LHX6Q9UPM6 363 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 ZFR2Q9UPR6 939 aaKnown RBP5.68□□□□□ -1.5
CLK1-207ENST00000461981 CBY1Q9Y3M2 126 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 DNMT3AQ9Y6K1 912 aaPredicted RBP5.68□□□□□ -1.5
CLK1-207ENST00000461981 A0A0B4J293 547 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 CCDC78A2IDD5 438 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 DBX1A6NMT0 343 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 CXorf49A8MYA2 514 aaPredicted RBP5.68□□□□□ -1.5
CLK1-207ENST00000461981 KCNU1A8MYU2 1149 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 LGALS8O00214 317 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 ZNF195O14628 629 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 ANGPT2O15123 496 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 SLC22A2O15244 555 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 SLC16A4O15374 487 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 SIGLEC5O15389 551 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 FZD6O60353 706 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 EIF3GO75821 320 aaKnown RBP eCLIP5.68□□□□□ -1.5
CLK1-207ENST00000461981 RASAL1O95294 804 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 PGLSO95336 258 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 IL33O95760 270 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 WDPCPO95876 746 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 C1QBP02746 253 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 FTH1P02794 183 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 CYP17A1P05093 508 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 ADH5P11766 374 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 ZP3P21754 424 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 MYL9P24844 172 aa5.68□□□□□ -1.5
CLK1-207ENST00000461981 FASP25445 335 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms