RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 KRT78Q8N1N4 520 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 DHRSXQ8N5I4 330 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 WDR48Q8TAF3 677 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 CYGBQ8WWM9 190 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 SNX19Q92543 992 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 PYURFQ96I23 114 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 BHLHE41Q9C0J9 482 aaPredicted RBP19.43■□□□□ 0.7
CCM2-203ENST00000461377 MKRN2Q9H000 416 aaKnown RBP19.43■□□□□ 0.7
CCM2-203ENST00000461377 TRIT1Q9H3H1 467 aaKnown RBP19.43■□□□□ 0.7
CCM2-203ENST00000461377 PELI2Q9HAT8 420 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 FBXL12Q9NXK8 326 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 ACSL5Q9ULC5 683 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 RNASET2O00584 256 aaKnown RBP19.43■□□□□ 0.7
CCM2-203ENST00000461377 KLHL18O94889 574 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 FUCA1P04066 466 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 SLC35G4P0C7Q5 338 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 ATP6V1B1P15313 513 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 EFNA1P20827 205 aaPredicted RBP19.43■□□□□ 0.7
CCM2-203ENST00000461377 NTSR1P30989 418 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 CLCNKAP51800 687 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 TMEM196Q5HYL7 178 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 KIAA1161Q6NSJ0 714 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 MTSS1LQ765P7 747 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 C17orf64Q86WR6 236 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 PTOV1Q86YD1 416 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 METTL25Q8N6Q8 603 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 NRTNQ99748 197 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 TPT1P8Q9HAU6 139 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 MYNNQ9NPC7 610 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 TAC3Q9UHF0 121 aa19.43■□□□□ 0.7
CCM2-203ENST00000461377 PCM1Q15154 2024 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 SAP18O00422 153 aaKnown RBP19.42■□□□□ 0.7
CCM2-203ENST00000461377 SNAP29O95721 258 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 HPRP00739 348 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 ADARB1P78563 741 aaKnown RBP19.42■□□□□ 0.7
CCM2-203ENST00000461377 SGCGQ13326 291 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 PDE7AQ13946 482 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 ADRM1Q16186 407 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 OTUD3Q5T2D3 398 aaPredicted RBP19.42■□□□□ 0.7
CCM2-203ENST00000461377 TSPAN14Q8NG11 270 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 GANCQ8TET4 914 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 C16orf78Q8WTQ4 265 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 FBXL20Q96IG2 436 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 ACAT2Q9BWD1 397 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 CAAP1Q9H8G2 361 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 WASH6PQ9NQA3 447 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 SH3BP4Q9P0V3 963 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 TRPM6Q9BX84 2022 aa19.42■□□□□ 0.7
CCM2-203ENST00000461377 A0A1W2PQU0 124 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 ALPLP05186 524 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 PPIBP23284 216 aaKnown RBP19.41■□□□□ 0.7
CCM2-203ENST00000461377 PTX3P26022 381 aaPredicted RBP19.41■□□□□ 0.7
CCM2-203ENST00000461377 RPL10P27635 214 aaKnown RBP19.41■□□□□ 0.7
CCM2-203ENST00000461377 FAM71E1Q6IPT2 247 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 USP51Q70EK9 711 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 CHST15Q7LFX5 561 aaPredicted RBP19.41■□□□□ 0.7
CCM2-203ENST00000461377 ZCCHC7Q8N3Z6 543 aaKnown RBP19.41■□□□□ 0.7
CCM2-203ENST00000461377 SVOPLQ8N434 492 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 OR14C36Q8NHC7 312 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 SMPDL3AQ92484 453 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 TSC22D3Q99576 134 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 TIMM29Q9BSF4 260 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 SPATA9Q9BWV2 254 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 PCBD2Q9H0N5 130 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 CHST8Q9H2A9 424 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 SAMD4AQ9UPU9 718 aaKnown RBP19.41■□□□□ 0.7
CCM2-203ENST00000461377 WDR37Q9Y2I8 494 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 C5orf42Q9H799 3197 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 H0YAE9 185 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 GBAP04062 536 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 FURINP09958 794 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 ACP5P13686 325 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 RPL3P39023 403 aaKnown RBP19.41■□□□□ 0.7
CCM2-203ENST00000461377 MAGEA2P43356 314 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 GAB1Q13480 694 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 CNPY1Q3B7I2 92 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 NADK2Q4G0N4 442 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 DUS1LQ6P1R4 473 aaKnown RBP19.41■□□□□ 0.7
CCM2-203ENST00000461377 R3HCC1LQ7Z5L2 792 aaKnown RBP19.41■□□□□ 0.7
CCM2-203ENST00000461377 STK32CQ86UX6 486 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 ZDHHC13Q8IUH4 622 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 SYNPOQ8N3V7 929 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 GOT1L1Q8NHS2 421 aaPredicted RBP19.41■□□□□ 0.7
CCM2-203ENST00000461377 ZFP90Q8TF47 636 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 SLC17A9Q9BYT1 436 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 GRIP2Q9C0E4 1043 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 RHBGQ9H310 441 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 FBRSQ9HAH7 460 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 CLK4Q9HAZ1 481 aaKnown RBP19.41■□□□□ 0.7
CCM2-203ENST00000461377 VPS4AQ9UN37 437 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 CORO2BQ9UQ03 480 aa19.41■□□□□ 0.7
CCM2-203ENST00000461377 MAGED1Q9Y5V3 778 aaPredicted RBP19.41■□□□□ 0.7
CCM2-203ENST00000461377 A0A1W2PPV9 198 aa19.4■□□□□ 0.7
CCM2-203ENST00000461377 PRR23AA6NEV1 266 aa19.4■□□□□ 0.7
CCM2-203ENST00000461377 G3V2T6 193 aa19.4■□□□□ 0.7
CCM2-203ENST00000461377 RNGTTO60942 597 aaKnown RBP19.4■□□□□ 0.7
CCM2-203ENST00000461377 DNTTP04053 509 aa19.4■□□□□ 0.7
CCM2-203ENST00000461377 IGFALSP35858 605 aa19.4■□□□□ 0.7
CCM2-203ENST00000461377 NR1H2P55055 460 aa19.4■□□□□ 0.7
CCM2-203ENST00000461377 HTR4Q13639 388 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms