RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 RASGEF1AQ8N9B8 481 aa7.82□□□□□ -1.16
ECHDC1-212ENST00000461239 DDHD1Q8NEL9 900 aa7.82□□□□□ -1.16
ECHDC1-212ENST00000461239 SETD7Q8WTS6 366 aaKnown RBP7.82□□□□□ -1.16
ECHDC1-212ENST00000461239 TRIM63Q969Q1 353 aa7.82□□□□□ -1.16
ECHDC1-212ENST00000461239 KIFC1Q9BW19 673 aa7.82□□□□□ -1.16
ECHDC1-212ENST00000461239 GPR87Q9BY21 358 aa7.82□□□□□ -1.16
ECHDC1-212ENST00000461239 ASB8Q9H765 288 aa7.82□□□□□ -1.16
ECHDC1-212ENST00000461239 SPATS2LQ9NUQ6 558 aaKnown RBP7.82□□□□□ -1.16
ECHDC1-212ENST00000461239 NLGN3Q9NZ94 848 aa7.82□□□□□ -1.16
ECHDC1-212ENST00000461239 VPS18Q9P253 973 aa7.82□□□□□ -1.16
ECHDC1-212ENST00000461239 SPASTQ9UBP0 616 aa7.82□□□□□ -1.16
ECHDC1-212ENST00000461239 MOSPD1Q9UJG1 213 aa7.82□□□□□ -1.16
ECHDC1-212ENST00000461239 FREM2Q5SZK8 3169 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 COL5A1P20908 1838 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 IGLV3-16A0A075B6K0 115 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 ZCWPW2A0A1B0GU75 182 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 A6NCN8 305 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 AQP7P3A6NL99 342 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 E7ENX8 843 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 GRID2O43424 1007 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 ASNA1O43681 348 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 SEC31AO94979 1220 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 TOP3BO95985 862 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 GOT2P00505 430 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 ELANEP08246 267 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 MLNP12872 115 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 HADHAP40939 763 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 ARCN1P48444 511 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 BLKP51451 505 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 NOVA1P51513 510 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 PDE1BQ01064 536 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 HHEXQ03014 270 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 TAP2Q03519 686 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 ITGA9Q13797 1035 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 DHX34Q14147 1143 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 ZNF658BQ4V348 819 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 PDCD4Q53EL6 469 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 DUPD1Q68J44 220 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 SNX20Q7Z614 316 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 SERPINA9Q86WD7 417 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 C17orf82Q86X59 251 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 SLC35F3Q8IY50 421 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 GALNT15Q8N3T1 639 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 FSTL5Q8N475 847 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 NOA1Q8NC60 698 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 PATE1Q8WXA2 126 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 CNDP2Q96KP4 475 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 APOLD1Q96LR9 279 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 RUNDC3BQ96NL0 473 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 OR2M4Q96R27 311 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 TRIM31Q9BZY9 425 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 IL22Q9GZX6 179 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 MRM3Q9HC36 420 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 TRNAU1APQ9NX07 287 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 GRHL1Q9NZI5 618 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 IL1RAPL1Q9NZN1 696 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 BFARQ9NZS9 450 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 MARCH4Q9P2E8 410 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 ASIC3Q9UHC3 531 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 APPL1Q9UKG1 709 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 SNX24Q9Y343 169 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 PRSS21Q9Y6M0 314 aa7.81□□□□□ -1.16
ECHDC1-212ENST00000461239 GOLGA4Q13439 2230 aaKnown RBP7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 ASXL3Q9C0F0 2248 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 CEP295Q9C0D2 2601 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 NEMP2A6NFY4 417 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 DIRC3C9JPN6 131 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 TNFSF14O43557 240 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 VEGFDO43915 354 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 OR1I1O60431 355 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 CDK14O94921 469 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 ZFPL1O95159 310 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 LDOC1O95751 146 aaPredicted RBP7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 TUBB4AP04350 444 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 F7P08709 466 aaPredicted RBP7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 CKMT1AP12532 417 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 ACP5P13686 325 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 CTSEP14091 401 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 NPPBP16860 134 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 CD53P19397 219 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 ACRV1P26436 265 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 ACADVLP49748 655 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 ANXA11P50995 505 aaKnown RBP7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 ARL4CP56559 192 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 CLDN6P56747 220 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 CACNG1Q06432 222 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 ELOCQ15369 112 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 SMAD1Q15797 465 aaKnown RBP7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 WHAMMP3Q1A5X7 153 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 ANKRD20A4Q4UJ75 823 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 ZRANB3Q5FWF4 1079 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 LDLRAP1Q5SW96 308 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 N4BP2L1Q5TBK1 243 aaPredicted RBP7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 CACHD1Q5VU97 1274 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 MRNIPQ6NTE8 343 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 SLC30A9Q6PML9 568 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 TMEM220Q6QAJ8 160 aa7.8□□□□□ -1.16
ECHDC1-212ENST00000461239 TMEM108Q6UXF1 575 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms