RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 SLC25A12O75746 678 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 ZNF189O75820 626 aaPredicted RBP16.22■□□□□ 0.19
TOP3A-202ENST00000461127 NEURL1O76050 574 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 C1orf105O95561 183 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 RBP3P10745 1247 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 PKMP14618 531 aaKnown RBP16.22■□□□□ 0.19
TOP3A-202ENST00000461127 DNASE1P24855 282 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 PTGER1P34995 402 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 COILP38432 576 aaPredicted RBP16.22■□□□□ 0.19
TOP3A-202ENST00000461127 FNTAP49354 379 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 MAT1AQ00266 395 aaKnown RBP16.22■□□□□ 0.19
TOP3A-202ENST00000461127 CCDC137Q6PK04 289 aaKnown RBP16.22■□□□□ 0.19
TOP3A-202ENST00000461127 AFTPHQ6ULP2 937 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 BIVMQ86UB2 503 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 MARVELD2Q8N4S9 558 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 CPSF7Q8N684 471 aaKnown RBP16.22■□□□□ 0.19
TOP3A-202ENST00000461127 POGLUT1Q8NBL1 392 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 MYRIPQ8NFW9 859 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 GRK7Q8WTQ7 553 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 TMEM125Q96AQ2 219 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 PLCD4Q9BRC7 762 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 POLDIP3Q9BY77 421 aaKnown RBP16.22■□□□□ 0.19
TOP3A-202ENST00000461127 SPATA7Q9P0W8 599 aa16.22■□□□□ 0.19
TOP3A-202ENST00000461127 RPH3AQ9Y2J0 694 aaPredicted RBP16.22■□□□□ 0.19
TOP3A-202ENST00000461127 FAM237BA0A1B0GVD1 139 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 NME2P1O60361 137 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 PRMT3O60678 531 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 NME2P22392 152 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 PSMA3P25788 255 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 AOAHP28039 575 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 BDKRB1P46663 353 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 EFNA3P52797 238 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 RNFT1Q5M7Z0 435 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 C8orf74Q6P047 294 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 DRICH1Q6PGQ1 229 aaPredicted RBP16.21■□□□□ 0.19
TOP3A-202ENST00000461127 GSTA5Q7RTV2 222 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 KLHDC8BQ8IXV7 354 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 LGI4Q8N135 537 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 MMGT1Q8N4V1 131 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 SLC35B2Q8TB61 432 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 MCOLN3Q8TDD5 553 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 ALPK1Q96QP1 1244 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 NPAS2Q99743 824 aa16.21■□□□□ 0.19
TOP3A-202ENST00000461127 HEATR5BQ9P2D3 2071 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 A0A1B0GTH9 108 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 A0A1W2PPV9 198 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 IQCF5A8MTL0 148 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 H0YIG0 161 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 KPNA5O15131 536 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 CDC40O60508 579 aaKnown RBP eCLIP16.2■□□□□ 0.18
TOP3A-202ENST00000461127 GAS8O95995 478 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 EZRP15311 586 aaKnown RBP16.2■□□□□ 0.18
TOP3A-202ENST00000461127 RPA3P35244 121 aaPredicted RBP16.2■□□□□ 0.18
TOP3A-202ENST00000461127 KCNJ1P48048 391 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 DR1Q01658 176 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 ACTN3Q08043 901 aaPredicted RBP16.2■□□□□ 0.18
TOP3A-202ENST00000461127 PTK6Q13882 451 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 PARP6Q2NL67 630 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 TEX35Q5T0J7 233 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 KCTD11Q693B1 232 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 TTC27Q6P3X3 843 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 ACAD11Q709F0 780 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 MAATS1Q7Z4T9 603 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 ANKRD37Q7Z713 158 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 LRRN4CLQ8ND94 238 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 LKAAEAR1Q8TD35 194 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 RMND5BQ96G75 393 aaPredicted RBP16.2■□□□□ 0.18
TOP3A-202ENST00000461127 OR2A5Q96R48 311 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 LPAR4Q99677 370 aa16.2■□□□□ 0.18
TOP3A-202ENST00000461127 PIH1D1Q9NWS0 290 aaKnown RBP16.2■□□□□ 0.18
TOP3A-202ENST00000461127 DRG1Q9Y295 367 aaKnown RBP16.2■□□□□ 0.18
TOP3A-202ENST00000461127 NDC80O14777 642 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 MAN1A2O60476 641 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 CCNDBP1O95273 360 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 GOT2P00505 430 aaKnown RBP16.19■□□□□ 0.18
TOP3A-202ENST00000461127 CYB561P49447 251 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 DGKQP52824 942 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 YBX1P67809 324 aaKnown RBP16.19■□□□□ 0.18
TOP3A-202ENST00000461127 DHX34Q14147 1143 aaKnown RBP16.19■□□□□ 0.18
TOP3A-202ENST00000461127 OASLQ15646 514 aaKnown RBP16.19■□□□□ 0.18
TOP3A-202ENST00000461127 CCSMST1Q4G0I0 132 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 CCDC38Q502W7 563 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 FASTKD1Q53R41 847 aaKnown RBP16.19■□□□□ 0.18
TOP3A-202ENST00000461127 PTRHD1Q6GMV3 140 aaKnown RBP16.19■□□□□ 0.18
TOP3A-202ENST00000461127 PAPD4Q6PIY7 484 aaKnown RBP16.19■□□□□ 0.18
TOP3A-202ENST00000461127 PAQR7Q86WK9 346 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 CCDC71Q8IV32 467 aaPredicted RBP16.19■□□□□ 0.18
TOP3A-202ENST00000461127 KRT222Q8N1A0 295 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 NOA1Q8NC60 698 aaKnown RBP16.19■□□□□ 0.18
TOP3A-202ENST00000461127 OR6P1Q8NGX9 317 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 OR4L1Q8NH43 312 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 PANX3Q96QZ0 392 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 CDCP1Q9H5V8 836 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 PCYOX1Q9UHG3 505 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 ANAPC5Q9UJX4 755 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 NFS1Q9Y697 457 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 JMJD1CQ15652 2540 aa16.19■□□□□ 0.18
TOP3A-202ENST00000461127 KRT87PA6NCN2 255 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 EFCAB8A8MWE9 144 aa16.18■□□□□ 0.18
TOP3A-202ENST00000461127 PSMD3O43242 534 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms