RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 MMP25Q9NPA2 562 aa7.43□□□□□ -1.22
HPS4-207ENST00000459918 NPDC1Q9NQX5 325 aaPredicted RBP7.43□□□□□ -1.22
HPS4-207ENST00000459918 KLF13Q9Y2Y9 288 aaPredicted RBP7.43□□□□□ -1.22
HPS4-207ENST00000459918 ASB1Q9Y576 335 aa7.43□□□□□ -1.22
HPS4-207ENST00000459918 KLK4Q9Y5K2 254 aa7.43□□□□□ -1.22
HPS4-207ENST00000459918 DUSP10Q9Y6W6 482 aa7.43□□□□□ -1.22
HPS4-207ENST00000459918 FBN3Q75N90 2809 aa7.43□□□□□ -1.22
HPS4-207ENST00000459918 FLNAP21333 2647 aaKnown RBP7.42□□□□□ -1.22
HPS4-207ENST00000459918 A0A1W2PPV9 198 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 ZNF860A6NHJ4 632 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 ERI2A8K979 691 aaKnown RBP7.42□□□□□ -1.22
HPS4-207ENST00000459918 ADAM10O14672 748 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 RDH16O75452 317 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 NEURL1O76050 574 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 NSA2O95478 260 aaKnown RBP7.42□□□□□ -1.22
HPS4-207ENST00000459918 IFNB1P01574 187 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 ADSLP30566 484 aaPredicted RBP7.42□□□□□ -1.22
HPS4-207ENST00000459918 CTNNA1P35221 906 aaKnown RBP7.42□□□□□ -1.22
HPS4-207ENST00000459918 EFNA3P52797 238 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 PNLIPRP1P54315 467 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 GPR85P60893 370 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 PLGLB1Q02325 96 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 PRDX1Q06830 199 aaKnown RBP7.42□□□□□ -1.22
HPS4-207ENST00000459918 PMPCAQ10713 525 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 TCEAL1Q15170 157 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 AADACL2Q6P093 401 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 ARHGAP11AQ6P4F7 1023 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 PAOXQ6QHF9 649 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 ACAD11Q709F0 780 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 PRSS41Q7RTY9 318 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 LRRC6Q86X45 466 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 CNGA4Q8IV77 575 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 TMEM156Q8N614 296 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 POGLUT1Q8NBL1 392 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 LRRN4CLQ8ND94 238 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 LILRB4Q8NHJ6 448 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 NINJ1Q92982 152 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 PEX11GQ96HA9 241 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 SEC16BQ96JE7 1060 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 ZNF778Q96MU6 729 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 OR2A5Q96R48 311 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 OLFM1Q99784 485 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 REPIN1Q9BWE0 567 aaKnown RBP7.42□□□□□ -1.22
HPS4-207ENST00000459918 ATG10Q9H0Y0 220 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 CLEC4MQ9H2X3 399 aaPredicted RBP7.42□□□□□ -1.22
HPS4-207ENST00000459918 MARCH4Q9P2E8 410 aaPredicted RBP7.42□□□□□ -1.22
HPS4-207ENST00000459918 ST6GALNAC2Q9UJ37 374 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 TFR2Q9UP52 801 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 EFR3BQ9Y2G0 817 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 PLEKHA6Q9Y2H5 1048 aa7.42□□□□□ -1.22
HPS4-207ENST00000459918 PHF3Q92576 2039 aaKnown RBP7.41□□□□□ -1.22
HPS4-207ENST00000459918 IGKV1-8A0A0C4DH67 115 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 ARHGEF33A8MVX0 844 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 H7BY64 318 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 ACOT7O00154 380 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 NIPSNAP2O75323 286 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 TOXO94900 526 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 IPO7O95373 1038 aaKnown RBP7.41□□□□□ -1.22
HPS4-207ENST00000459918 HOXD4P09016 255 aaPredicted RBP7.41□□□□□ -1.22
HPS4-207ENST00000459918 SLC35G6P0C7Q6 338 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 IGFBP2P18065 325 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 JAK1P23458 1154 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 FMO4P31512 558 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 GRK3P35626 688 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 HSD17B2P37059 387 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 HADHBP55084 474 aaKnown RBP7.41□□□□□ -1.22
HPS4-207ENST00000459918 GDF10P55107 478 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 SLC26A5P58743 744 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 RPS15AP62244 130 aaKnown RBP7.41□□□□□ -1.22
HPS4-207ENST00000459918 SKP1P63208 163 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 ABATP80404 500 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 LTBQ06643 244 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 USP10Q14694 798 aaKnown RBP7.41□□□□□ -1.22
HPS4-207ENST00000459918 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.41□□□□□ -1.22
HPS4-207ENST00000459918 RNFT1Q5M7Z0 435 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 H3F3CQ6NXT2 135 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 ZNF585AQ6P3V2 769 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 ZNF534Q76KX8 674 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 WDR53Q7Z5U6 358 aaPredicted RBP7.41□□□□□ -1.22
HPS4-207ENST00000459918 FGD2Q7Z6J4 655 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 SDCCAG8Q86SQ7 713 aaPredicted RBP7.41□□□□□ -1.22
HPS4-207ENST00000459918 VSTM4Q8IW00 320 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 LGI4Q8N135 537 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 CYP4Z2PQ8N1L4 340 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 KIF2BQ8N4N8 673 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 MARVELD2Q8N4S9 558 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 RNF214Q8ND24 703 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 ACRBPQ8NEB7 543 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 TSLPQ969D9 159 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 ALKBH8Q96BT7 664 aaKnown RBP7.41□□□□□ -1.22
HPS4-207ENST00000459918 PRAP1Q96NZ9 151 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 PANX2Q96RD6 677 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 PKP4Q99569 1192 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 NPAS2Q99743 824 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 TREX2Q9BQ50 279 aaPredicted RBP7.41□□□□□ -1.22
HPS4-207ENST00000459918 MACROD1Q9BQ69 325 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 GPATCH1Q9BRR8 931 aaKnown RBP7.41□□□□□ -1.22
HPS4-207ENST00000459918 DEFB127Q9H1M4 99 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 SYNPO2LQ9H987 977 aa7.41□□□□□ -1.22
HPS4-207ENST00000459918 ERVK-11Q9UQG0 969 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms