RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 GPR85P60893 370 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 PLOD1Q02809 727 aaPredicted RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 ACVR1Q04771 509 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 Q0VFX4 171 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 TSTA3Q13630 321 aaPredicted RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 MYBPC3Q14896 1274 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 KIR2DS3Q14952 304 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 SIX1Q15475 284 aaPredicted RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 TRIP13Q15645 432 aaPredicted RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CYP2A13Q16696 494 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 SLC5A12Q1EHB4 618 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 DNAJC21Q5F1R6 531 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 VWA2Q5GFL6 755 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CRB2Q5IJ48 1285 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 PCID2Q5JVF3 399 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CTSL3PQ5NE16 218 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 SEL1L2Q5TEA6 688 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 LYPLAL1Q5VWZ2 237 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 PTRHD1Q6GMV3 140 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 FRMPD2BQ6IN97 320 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 FBXO42Q6P3S6 717 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 ABHD17CQ6PCB6 329 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CNSTQ6PJW8 725 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 AFTPHQ6ULP2 937 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 SUSD1Q6UWL2 747 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 KIRREL2Q6UWL6 708 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CYP2R1Q6VVX0 501 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 COX15Q7KZN9 410 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 OVCH1Q7RTY7 1134 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CUZD1Q86UP6 607 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 ZC3H7AQ8IWR0 971 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 ZADH2Q8N4Q0 377 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CCDC89Q8N998 374 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 PPHLN1Q8NEY8 458 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 OR2Y1Q8NGV0 311 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 OR2L8Q8NGY9 312 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 DNAJB14Q8TBM8 379 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 PROKR1Q8TCW9 393 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 C8orf44Q96CB5 159 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 TTC1Q99614 292 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 KCNJ15Q99712 375 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 ACAT2Q9BWD1 397 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 IPPKQ9H8X2 491 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 SYNPO2LQ9H987 977 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 SLC6A20Q9NP91 592 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CUTCQ9NTM9 273 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CATSPERZQ9NTU4 200 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 ABCF3Q9NUQ8 709 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 IL1RAPL1Q9NZN1 696 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 C5AR2Q9P296 337 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CTSFQ9UBX1 484 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 FBLN5Q9UBX5 448 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CDC23Q9UJX2 597 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 FBXL4Q9UKA2 621 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 ADAMTS6Q9UKP5 1117 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 B3GNT3Q9Y2A9 372 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CRYL1Q9Y2S2 319 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 ZNF281Q9Y2X9 895 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 TCAF1Q9Y4C2 921 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 NPFFR2Q9Y5X5 522 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 COPG1Q9Y678 874 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 USP9XQ93008 2570 aaPredicted RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 SPENQ96T58 3664 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 PKDREJQ9NTG1 2253 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 USP9YO00507 2555 aaPredicted RBP4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 NBPF19A0A087WUL8 3843 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 A0A1B0GX78 115 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 A0A1W2PPV9 198 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 HYKKA2RU49 373 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 ANKUB1A6NFN9 424 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 ERI2A8K979 691 aaKnown RBP4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 RASGRF2O14827 1237 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 DSCR3O14972 297 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 NPHS1O60500 1241 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 NIPSNAP2O75323 286 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 F10P00742 488 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 STATHP02808 62 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 CHRM3P20309 590 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 ENDOUP21128 410 aaKnown RBP4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 MMP11P24347 488 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 CXCR5P32302 372 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 PPARGP37231 505 aaPredicted RBP4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 VPS41P49754 854 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 ARSFP54793 590 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 RPL11P62913 178 aaKnown RBP4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 BASP1P80723 227 aaKnown RBP4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 AIMP2Q13155 320 aaKnown RBP4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 GRM7Q14831 915 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 RPS6KA1Q15418 735 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 SYT16Q17RD7 645 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 VWA5B1Q5TIE3 1220 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 HLA-DQA1Q5Y7H0 255 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 FAAH2Q6GMR7 532 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 IGFL3Q6UXB1 125 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 UNC5DQ6UXZ4 953 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 LINC00696Q6ZRV3 163 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 Q6ZS92 163 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 GSTA5Q7RTV2 222 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 OTOAQ7RTW8 1153 aa4.47□□□□□ -1.69
GTF3C3-208ENST00000455546 STRA8Q7Z7C7 330 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms